Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_026588.1 Length=60285 Score E Sequences producing significant alignments: (Bits) Value seq4176 248 3e-61 >seq4176 Length=744 Score = 248 bits (274), Expect = 3e-61 Identities = 300/400 (75%), Gaps = 20/400 (5%) Strand=Plus/Plus Query 45366 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 45425 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 45426 AACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAACTGCTGCGCATCCTCGCG 45485 ||| |||||||| ||||||||||| | || |||||| | ||||| || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 45486 CCCGGGCGGATCTACGCCTG---CCATGTCAAGGACCGCATCTTGTTCGGCAACGTCACC 45542 || || ||| | |||||| ||| || |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 45543 GGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGC 45599 |||| || || || |||||| |||||||||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 45600 AAACACGGCTTCGACTACCTCGGCATGATCATCGTGGTCACCGATGTGGTGCGGGAAAAC 45659 ||||||||| | | | | |||||||||| ||| |||||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 45660 AACCAGACGTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGG 45715 |||||||| ||||| ||| | || | ||| || ||| || |||| ||| |||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGG 352 Query 45716 CGTTGGCTCCCCGGAATACGTTCTGTTGTTCCACAAACCG 45755 | ||| ||| |||||||| ||| || | | ||| ||| Sbjct 353 CTGCGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCCG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 192779294188514