Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 147 2e-30
seq3934 104 2e-17
seq4836 93.3 4e-14
>seq3060
Length=205498
Score = 147 bits (162), Expect = 2e-30
Identities = 158/209 (76%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
||||| || || || || || || |||||||||||||| | ||| || ||| |||
Sbjct 122862 ACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCG 122803
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||||||||| |||||||||||||||||||| || || || || || || || ||||||
Sbjct 122802 AGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGA 122743
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || |||||| ||| | |||||| || || || || || || || || |||||
Sbjct 122742 ATCTTAGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTT 122683
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || || ||||| |||||
Sbjct 122682 CCGGTCAAGGTCTTCACAAAAATCTGCAT 122654
Score = 111 bits (122), Expect = 2e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 134498 TCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGA 134557
|| ||| || | || || ||| |||||| || ||||| || ||| | || ||
Sbjct 123097 TCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACC 123038
Query 134558 GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTT 134617
|| || ||||| || || ||||| || | ||||| || ||||| || || ||||||||
Sbjct 123037 ATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTT 122978
Query 134618 TTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAAT 134677
||||||||||| || || ||| | ||||| ||||| || || || | |||||
Sbjct 122977 ATCTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAAT 122918
Query 134678 GGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || |||||||| || ||||| |||||||||||
Sbjct 122917 AGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882
Score = 107 bits (118), Expect = 2e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| ||| || | || || || || || ||||||||||| ||||| || ||
Sbjct 122652 CCACCTCGGAGACGGAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTATAATCAGAG 122593
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| || || || || |||||||| || |||||||| || |||||||| || ||
Sbjct 122592 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCGAAAATCAAGCGTTGCTGATCTGGAGGG 122533
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||| || ||| || || | || ||||| ||||| ||
Sbjct 122532 ATGCCCTCCTTATCCTGAATCTTGGTTTTCACGTTATCGATGGTATCGGAGGATTCAACC 122473
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
|||||||| || || || || || | ||| || ||||
Sbjct 122472 TCGAGAGTGATAGTCTTTCCCGTGAGAGTCTTGACGA 122436
>seq3934
Length=413549
Score = 104 bits (114), Expect = 2e-17
Identities = 168/239 (70%), Gaps = 2/239 (1%)
Strand=Plus/Minus
Query 7529 TGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGG 7588
||||| |||||| ||| | ||| || || ||||||||| | |||| || ||||
Sbjct 409381 TGTTGCGAATCAATGGCAAGGTCGCTGAGCGTCCGCAACACATGATTATGCGTGTTGCGG 409322
Query 7589 TGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGA 7648
| |||||||| |||||||||||||| || | |||||||| | |||||||| ||
Sbjct 409321 TTGGCATTCATGGCGAAGACATTGAGAAGGCGATCGAAACGTATAATCTGATGTCTCAGA 409262
Query 7649 AACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGC-GCCTCAATTG 7707
|| | ||||| || ||||| ||||| | || |||||| || | ||| || || ||
Sbjct 409261 AATATTTTACACATGCTTCCCCCACTCTTTTCAACGCGGGAAC-ACCGCAACCACAGATG 409203
Query 7708 TCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCT 7766
|||| |||||| | | ||| ||||| |||||||| || || ||| | || ||
Sbjct 409202 GCCTCCTGTTTTCTCATTGATATGAAGGAAGATAGCATCGATGGTATCTACGATACTCT 409144
>seq4836
Length=199183
Score = 93.3 bits (102), Expect = 4e-14
Identities = 129/181 (71%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 134524 CCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAA 134583
||||||| || ||||| |||| | || | ||| |||||||| || || || ||||
Sbjct 162949 CCTTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAA 162890
Query 134584 TCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGT 134643
||||||||||||| || || || |||||||| || || || ||||| || || ||
Sbjct 162889 TCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGT 162830
Query 134644 CCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703
| | |||||| || ||||| || || || || || || ||||| | || || ||||
Sbjct 162829 CGATCGTGTCGCTGGACTCCACTTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 162770
Query 134704 A 134704
|
Sbjct 162769 A 162769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505367753904520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |