Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3934 255 8e-63 >seq3934 Length=413549 Score = 255 bits (282), Expect = 8e-63 Identities = 602/901 (67%), Gaps = 16/901 (2%) Strand=Plus/Plus Query 69517 TCGAATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGAC 69576 ||||||||||| || |||| ||| | ||||| | ||| |||||||| | ||| | | Sbjct 408745 TCGAATTCATCACCGTAAACGTCAGCTAATCCTGACGCTTCGTTTGGACAAAACAAGGTC 408804 Query 69577 CACACATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAG 69636 || | | | | || ||| || ||||| || |||||||| |||||||||| | ||| Sbjct 408805 CAATCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCGGGGGTCCAAAGAGCAAGGAAG 408864 Query 69637 AGATCTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATA 69696 ||||| | || ||| ||| || ||||| ||||| ||||| | |||||| | Sbjct 408865 AGATCACGGGCTCTTACTTCCTCCTTTCCGTGGTTTTTACGGAGATCTAAAAACTCGAAG 408924 Query 69697 ATATCAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCC 69756 ||||| || ||||| ||||| ||||| || || | | | || || ||||| || || || Sbjct 408925 ATATCGGAGTGCCAAGGTTCAAGATAAATGGCAAAGGCGCCAGGCCGTTTGTTGCCACCT 408984 Query 69757 TGATCTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGAT 69816 || || | |||| || || || ||| |||| | ||||| || | || || ||||| Sbjct 408985 TGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATGGGGACGATTCCGTTAGAG 409044 Query 69817 TTACCATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCT 69876 || |||||||| | ||| || || | ||||||||| | ||| ||||| Sbjct 409045 GAGCCGTTTGTTCCTGCAATGTAGGAGCCAGTCGCGCGAATACGATGGATATTAAGACCG 409104 Query 69877 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCT 69936 || || || || | || || || ||||| || || | || || || ||||| || Sbjct 409105 ATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGAGTATCGTAGATACCATCG 409164 Query 69937 ATGCTATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCC 69996 |||||||| || |||| | || ||||||||| | ||| || | || |||||| Sbjct 409165 ATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATCTGTGGTTGCGGTGTTCCC 409224 Query 69997 GCATTAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTT 70056 || || || | || || || || || || || |||| | ||| | |||||| || ||| Sbjct 409225 GCGTTGAAAAGAGTGGGGGAAGCATGTGTAAAATATTTCTGAGACATCAGATTATACGTT 409284 Query 70057 TCAATAGCTGATTCTATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGC 70116 || || || || || || |||||| || | ||| |||||||| | ||| || Sbjct 409285 TCGATCGCCTTCTCAATGTCTTCGCCATGAATGCCAACCGCAACACGCATAATCATGTGT 409344 Query 70117 TGAGGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTA 70176 || || || || | || ||| ||| |||||| ||||| | || | |||||| Sbjct 409345 TGCGGACGCTCAGCGACCTTGCCATTGATTCGCAACAGATATGACCTCTCTAAAGTTTTG 409404 Query 70177 AACCCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTAT 70234 || || ||||| | || ||||| || | || |||| ||| | ||||| |||| | Sbjct 409405 AATCCGAAATACTGATAGTTGAAA--TCACGATCATAAACAATGGCCGAATTAAGTTCCT 409462 Query 70235 CCTTATATTTGGTAACTATATCCATA-ACAGTAGGTGAGATAAT---CGGAGATCGTTTA 70290 | || || |||| || ||| || | | || || || || || ||| || Sbjct 409463 CGGCATGCTTCATAACAAT-TCCGTAGGTTTTTTGAGAAATCATAGGCGCAGGTCGGTT- 409520 Query 70291 CCATTTTTAGGATTAACATAGTTGAATAAA--TCTTCCATTACATCACTAAATAGttttt 70348 |||||| || |||| |||| ||||| || || || || | || |||||| Sbjct 409521 --ATTTTTCGGGTTAATGTAGT--GATAAAGGTCGTCAATGACCGAAGAGAACTGTTTTT 409576 Query 70349 ttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGAT 70408 | || | |||||||| || || | ||||||||||||||| || ||||||||||| || | Sbjct 409577 TGGTCTGCTTGTGTAGGTTGGACACGGCTATTCTGGCTGCAAGGATAGCATAGTCTGGGT 409636 Query 70409 G 70409 | Sbjct 409637 G 409637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686867147567640