Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq2213 145 6e-30
>seq2213
Length=76508
Score = 145 bits (160), Expect = 6e-30
Identities = 329/492 (67%), Gaps = 17/492 (3%)
Strand=Plus/Minus
Query 19378 GGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAA 19434
|| |||||||||||||| || | || | ||| | || | |||| | || |||
Sbjct 4044 GGCAAAACATTAATTGCAAGGCAGATTGGAAAAATGCTGAATGCAAAGGAGCC---CAAG 3988
Query 19435 ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGA 19494
|||| || ||||||||| || | || ||||| || |||||||||||||| ||| | ||
Sbjct 3987 GTTGTCAACGGTCCTGAAGTCCTGAACAAATACGTTGGTCAATCGGAAGAGAATATCAGA 3928
Query 19495 CGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTCTTTGCA 19553
| ||||| |||||||| |||| | ||| | |||| | | ||| | | ||
Sbjct 3927 AAGCTTTTTGCCGACGCTGAGAAAGAGTACAAA-GAGAAGGGAGAGGAGAGTGGTCTTCA 3869
Query 19554 CATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--------- 19604
||| || || | || || |||||||| | || || |||||||| |||
Sbjct 3868 CATCATCATTTTCGACGAGTTGGACGCCGTTTGCAAACAAAGAGGAAGTGGAGCCGGGGG 3809
Query 19605 TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAA 19664
|| | ||| || ||||| ||| ||||| || || |||| ||| | ||||||||| |
Sbjct 3808 TGGCACTGGTGTTGGTGACAGTGTCGTCAACCAGCTTTTGTCCAAACTTGACGGTGTTGA 3749
Query 19665 CCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC 19724
|| | || ||||| ||| | ||||| |||||||| | |||| | || || |||
Sbjct 3748 TCAGTTAAACAATATCTTATTGATTGGAATGACTAACCGGATGGATATGATTGATGACGC 3689
Query 19725 CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGG 19784
| |||||||||||||| ||||| || | || |||||| |||| |||||| ||
Sbjct 3688 TCTTTTACGACCCGGTCGTTTGGAGGTACACATGGAAATTTCTCTACCTGATGAACAAGG 3629
Query 19785 ACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGA 19844
| || | || ||||| || || ||| | |||||| || ||||| | ||
Sbjct 3628 CAGAGTCCAGATCTTAAAGATTCACACAAAGAAGATGCGAGAAGGCAACCTCATGGATAG 3569
Query 19845 CGATGTAGATCT 19856
||| ||||| ||
Sbjct 3568 CGACGTAGACCT 3557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397432501780255
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |