Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq2213 145 6e-30 >seq2213 Length=76508 Score = 145 bits (160), Expect = 6e-30 Identities = 329/492 (67%), Gaps = 17/492 (3%) Strand=Plus/Minus Query 19378 GGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA---CAAAACAACCTCCCAAA 19434 || |||||||||||||| || | || | ||| | || | |||| | || ||| Sbjct 4044 GGCAAAACATTAATTGCAAGGCAGATTGGAAAAATGCTGAATGCAAAGGAGCC---CAAG 3988 Query 19435 ATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGA 19494 |||| || ||||||||| || | || ||||| || |||||||||||||| ||| | || Sbjct 3987 GTTGTCAACGGTCCTGAAGTCCTGAACAAATACGTTGGTCAATCGGAAGAGAATATCAGA 3928 Query 19495 CGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAA-AGTTCTTTGCA 19553 | ||||| |||||||| |||| | ||| | |||| | | ||| | | || Sbjct 3927 AAGCTTTTTGCCGACGCTGAGAAAGAGTACAAA-GAGAAGGGAGAGGAGAGTGGTCTTCA 3869 Query 19554 CATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGG--------- 19604 ||| || || | || || |||||||| | || || |||||||| ||| Sbjct 3868 CATCATCATTTTCGACGAGTTGGACGCCGTTTGCAAACAAAGAGGAAGTGGAGCCGGGGG 3809 Query 19605 TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAA 19664 || | ||| || ||||| ||| ||||| || || |||| ||| | ||||||||| | Sbjct 3808 TGGCACTGGTGTTGGTGACAGTGTCGTCAACCAGCTTTTGTCCAAACTTGACGGTGTTGA 3749 Query 19665 CCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC 19724 || | || ||||| ||| | ||||| |||||||| | |||| | || || ||| Sbjct 3748 TCAGTTAAACAATATCTTATTGATTGGAATGACTAACCGGATGGATATGATTGATGACGC 3689 Query 19725 CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTAACTTACCCGATGAATGTGG 19784 | |||||||||||||| ||||| || | || |||||| |||| |||||| || Sbjct 3688 TCTTTTACGACCCGGTCGTTTGGAGGTACACATGGAAATTTCTCTACCTGATGAACAAGG 3629 Query 19785 ACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATGA 19844 | || | || ||||| || || ||| | |||||| || ||||| | || Sbjct 3628 CAGAGTCCAGATCTTAAAGATTCACACAAAGAAGATGCGAGAAGGCAACCTCATGGATAG 3569 Query 19845 CGATGTAGATCT 19856 ||| ||||| || Sbjct 3568 CGACGTAGACCT 3557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397432501780255