Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3934 192 7e-44
seq2228 129 7e-25
>seq3934
Length=413549
Score = 192 bits (212), Expect = 7e-44
Identities = 709/1085 (65%), Gaps = 38/1085 (4%)
Strand=Plus/Plus
Query 110354 GCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGC 110413
||| ||| ||||||||||||||||| ||||| || || |||||| | | ||||
Sbjct 407565 GCCATTGTACGGAGATAGTACATCCCAGTCTTCAGGCCCAACTTCCATCCCGCAAAATGC 407624
Query 110414 ATAGAAGAGAGCTTGGACATCGTTGGA-CTTTCC-ATGAAGAGGTTCATACTTTGACTTT 110471
|| | || ||| ||| || || |||| ||| || ||| | | |||| ||
Sbjct 407625 ATGCTGGTGATTTTGCCCATTGTAGGCTCTTTGAGATG--GATGTTGAGAGATTGAGATT 407682
Query 110472 GGTCAATGAA-GCGCCCCCGTTGTGCCGCCATATCAATGACA-TCCTTCATCTTA-ATTT 110528
| || ||||| ||||||| || || ||||| | ||||| ||||| | | ||||
Sbjct 407683 GATCGATGAATGCGCCCCGGTCA-GCAGCCATCTGAATGATGGTCCTT--TGGGAGATTT 407739
Query 110529 CCCAAACTGTGCGATAGAGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGG 110588
|||| ||||| |||||| ||||| || | ||||||| | ||| ||||||| |
Sbjct 407740 CCCACACTGTCTTGTAGAGAGCTTTGATGTCTGCAGGGATATTGGGGATGTTCTGGACTG 407799
Query 110589 AACCCCCCGCCTTCACCA----TGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTC 110644
|||| ||| ||| || || | | |||||| | | |||||||| || | |
Sbjct 407800 AACC----GCCGTCAGCAATAATGCGGTTCTTCATGTTGTCTGACCAGAGGCCGAGATCA 407855
Query 110645 TTGAGGTCATTGACGAGGTGCTTG-TTGACAATGACAAACTCACCTGCGAGGGTTCTTCT 110703
|| || |||| || | | | ||||| | || || ||||| || | |
Sbjct 407856 ACAAGATCCTTGA-GAAGCCATGGATTGACGACTTGGAATTCGCCTGCAAGAACCCGGCG 407914
Query 110704 CAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGT 110763
||||||||||| ||||||||| ||||| ||||| || ||| | ||| || ||
Sbjct 407915 AGAGTAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAAACCGAGGATCTGACTCGT 407974
Query 110764 GGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCG 110823
| ||| || ||||| || || | | | |||||| || | ||| | | |||
Sbjct 407975 GCTGGCAGTAGGCATCGGAGCAACAAGTAAACTGTTGCGTACACCGTGTTTTGCGATATC 408034
Query 110824 TTCCTTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATGTCAAAC 110881
| |||||| |||||||| | | | || | || |||| |||| |||| || ||
Sbjct 408035 CTTCTTGAGGGTGTCCCAGTCCCAAAGGTCAG-TCGGAGTCACGTTCC-ACATATCGTAC 408092
Query 110882 TG--AAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTT 110939
|| ||| |||| ||| ||| |||||||| ||| | |||||||| | ||| | | |
Sbjct 408093 TGCAAAGTACCCTTTGAAACG--GGAGAACCTTCATAAGTTTCATAAGGACCATCAACCT 408150
Query 110940 CAGCCAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCAT 110999
|| | ||||| ||| ||| | ||| || || || ||||| ||||| || ||
Sbjct 408151 TGGCTATGTCACAAGACGCGGTCAGAGCTGCATGGTAGATTGTTTCGAAGATTTGAATAT 408210
Query 111000 TCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGA 111059
||| || ||| || ||| || ||||| | | || | || || |||| ||||
Sbjct 408211 TCAACTGCTTTGCCTCAGGCGAGTCAAACGGCAATCGCAGCGCAAGGAAAGCATCAGCGA 408270
Query 111060 GACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA- 111118
| || || ||||||| ||||||| | || || | ||| ||| | || |||
Sbjct 408271 GTCCCTGCACACCCACCGCAATAGGACGATGACGGAAGTTACTCTTCCTGGCT-TCTGGG 408329
Query 111119 ACGGGATAAAAATTTCTGTCAATGA-CTCGGTTTAGATTTTTGGTAACAAT--CTT-TGT 111174
|||||||| ||| ||||||||| || | || || ||| ||||| ||| |||
Sbjct 408330 ACGGGATAGTGATTGTTGTCAATGATCTTGTTTAAG----TTGAGAACAAGGACTTGTGT 408385
Query 111175 GATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAG 111234
|| |||||| | | | || | ||| | || | || |||||| | || |
Sbjct 408386 GACTTCATGCAATCTCCCAAAGTCATACTCGCCCCGGACAGGATCGACATATGTGGGCAA 408445
Query 111235 GGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTC 111294
|| | || |||||||||||||| || || ||| | |||||||| | |||||
Sbjct 408446 AGCAAGGGACGCCAAATTGCAAACTGCGACTTCGTCCGGCGCGGTGTACTCGATGATTTC 408505
Query 111295 TGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCA 111354
|| || |||||||| ||| ||| || || | || |||||||||||||| ||||||
Sbjct 408506 CGTGCACAAGTTGGAGCTCCGAATAGTTCCAAGGTTTTTTTGGTTACTCTTGCGGTTGCA 408565
Query 111355 CGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTT 111414
|||||| || || |||||| |||| |||| ||||| || || | | | |||||| |
Sbjct 408566 CGCATCTTTATAAAGCATGAAGGGGTTCCCAGTCTCTGTTTGAGCCTCCAAAATAGCATA 408625
Query 111415 CCAAA 111419
|||||
Sbjct 408626 CCAAA 408630
>seq2228
Length=283306
Score = 129 bits (142), Expect = 7e-25
Identities = 334/504 (66%), Gaps = 20/504 (4%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || || ||||||||||| |||||||||||||| || | | ||||| ||||||
Sbjct 201894 TAATCACCAACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAACGAGATGTTATCCATA 201835
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 122484
||||||||||| || | || || | | | | || | | |||| ||
Sbjct 201834 AAGTCAAATGGGTTGGTGGCATTGTAGAACTTTTTGTTGCCCAAAGCAACA------AGC 201781
Query 122485 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGG 122544
|| | || | ||| |||| || || | | |||| || | |||||| || | |||
Sbjct 201780 AGTCTGTCGGCAACAAACTCGATATATTGGCACATGAGCTTGGCGTTCATGCCAAGAAGG 201721
Query 122545 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 122604
|||||| || || || | ||| | |||||||||||||| |||||| | | ||||
Sbjct 201720 GCACATGGAAGAGCATCAGTTAAGAATTCCTTCTCAATCTCAACTGCCTCTGTGATGATG 201661
Query 122605 GCGTGGATAGTTTCGGTAGTG---GGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 122661
|| | | | | | || | || | || || | |||||| ||||
Sbjct 201660 GCCTCAACGG---CCGAAGGGCCGGGGCGATGGCGGAGGTGGGAGAAGAGGAGGCAGGCA 201604
Query 122662 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGC 122721
|| || |||||||||||| || |||||||| | |||||| || || ||||| |||
Sbjct 201603 AAGTCGGTGTGGAGACCCTCGTCACGGGAAATCAATTCATTCGAAAAAGTGAGACCGGGC 201544
Query 122722 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 122781
|| || || || ||||||||||| |||||| ||| || || ||||||||||||
Sbjct 201543 ATAAGGCCACGTTTCTTCAACCAGAAAATAGAAGCGAAAGAGCCACTGAAGAAGATACCT 201484
Query 122782 TCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCA 122840
|| || ||||| |||| ||||||| |||||||| | || | ||| | | | |||
Sbjct 201483 TCAACGGCTGCAAAGGCAACCAGGCGTTGGGCGAAGGTG-GATTCCTTGTCTTGGATCCA 201425
Query 122841 TTTCATTGCCCATTTCGCCTTCTT 122864
| || ||||| | ||||||||
Sbjct 201424 TCGAATGGCCCAATCAGCCTTCTT 201401
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627993917709600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |