Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq3934 149 8e-31
seq2228 145 9e-30
seq4759 96.9 4e-15
>seq3934
Length=413549
Score = 149 bits (164), Expect = 8e-31
Identities = 694/1078 (64%), Gaps = 28/1078 (3%)
Strand=Plus/Plus
Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887
||| ||| ||||| ||||||||||| ||||| || ||| |||||| | | ||||
Sbjct 407565 GCCATTGTACGGAGATAGTACATCCCAGTCTTCAGGCCCAACTTCCATCCCGCAAAATGC 407624
Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGA-CTTTCC-ATGAAGAGGTTCATACTTTGGGATT 117945
|| || | ||| | || || |||| ||| || ||| | | ||| ||||
Sbjct 407625 ATGCTGGTGATTTTGCCCATTGTAGGCTCTTTGAGATG--GATGTTGAGAGATTGAGATT 407682
Query 117946 GATCGATGAA-GCGTCCCCGATCCGCCGCCATATCAATCACA-TCCTTCATCTTGATTTC 118003
|||||||||| ||| ||||| || || ||||| | ||| | ||||| ||||||
Sbjct 407683 GATCGATGAATGCG-CCCCGGTCAGCAGCCATCTGAATGATGGTCCTTTGGGA-GATTTC 407740
Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063
|||||| ||| ||||||| || || || | ||||||| ||| || |||| ||
Sbjct 407741 CCACACTGTCTTGTAGAGAGCTTTGATGTCTGCAGGGATATTGGGGATGTTCTGGACTGA 407800
Query 118064 TCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 118123
|| || | | ||| | | |||||| | | ||||||||| || | | ||
Sbjct 407801 ACCGCCGTCAGCAATAATGCGGTTCTTCATGTTGTCTGACCAGAGGCCGAGATCAACAAG 407860
Query 118124 ATCCTCCACGAG--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 118181
||||| | || ||| |||||| || || || || || || || | |||
Sbjct 407861 ATCCTTGAGAAGCCATGG--ATTGACGACTTGGAATTCGCCTGCAAGAACCCGGCG-AGA 407917
Query 118182 -TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240
||||| || | |||||||||||||| || || ||| ||| | ||| || |||
Sbjct 407918 GTAGATGTTTGATGTGTATGGCTCAAAACATTCGTTGAAACCGAGGATCTGACTCGTGCT 407977
Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCT-TTTCCCTAATGCGTT 118299
||| || ||||| || || | || | ||||| || | ||| | ||| | | | ||
Sbjct 407978 GGCAGTAGGCATCGGAGCAACAAGTAAACTGTTGCGTACACCGTGTTTTGCGATATCCTT 408037
Query 118300 CCTTGAGAGCGTCCCAGTCGTA--GTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTG 118357
| ||||| | ||||||||| | | | || | | | | | ||||||||| ||||
Sbjct 408038 C-TTGAGGGTGTCCCAGTCCCAAAGGTCAG--TCGGAGTCACGTTCCACATATCGTACTG 408094
Query 118358 GAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGC 118417
| |||| | || | || || || ||| | || ||||| || || ||||||| ||
Sbjct 408095 CAAAGTACCCTTTGAAACGGGAGAACCTTCATAAGTTTCATAAGGACCATCAACCTTGGC 408154
Query 118418 CAATTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT 118477
| || | ||| || ||||| || || |||||||| || || || |||||
Sbjct 408155 TATGTCACAAGACGCGGTCAGAGCTGCATGGTAGATTGTTTCGAAGATTTGAATATTCAA 408214
Query 118478 TGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACC 118537
||| ||||| || ||||||| | ||| | || || |||| ||||| ||
Sbjct 408215 CTGCTTTGCCTCAGGCGAGTCAAACGGCAATCGCAGCGCAAGGAAAGCATCAGCGAGTCC 408274
Query 118538 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGG 118596
|| ||||| | |||| || ||||| | | ||| ||||| || ||| ||||
Sbjct 408275 CTGCACACCCACCGCAATAGGACGATGACGGAAGTTACTCTTCCTGGCT-TCTGGGACGG 408333
Query 118597 GATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTT-TGTGATTT 118653
|||| ||| | || || | | | |||| || | |||| ||| ||||| ||
Sbjct 408334 GATAGTGATTGTTGTCAATGATCTTGTTTAAGTT---GAGAACAAGGACTTGTGTGACTT 408390
Query 118654 CATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGA 118713
|||| | | | | ||| | || | || |||||| | || | || |
Sbjct 408391 CATGCAATCTCCCAAAGTCATACTCGCCCCGGACAGGATCGACATATGTGGGCAAAGCAA 408450
Query 118714 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGC 118773
||||||| ||| || || | | || ||| | |||||||| || ||||||||||
Sbjct 408451 GGGACGCCAAATTGCAAACTGCGACTTCGTCCGGCGCGGTGTACTCGATGATTTCCGTGC 408510
Query 118774 ACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 118833
||||||| || ||| ||| || || | ||| ||||| || ||| ||| |||||||
Sbjct 408511 ACAAGTTGGAGCTCCGAATAGTTCCAAGGTTTTTTTGGTTACTCTTGCGGTTGCACGCAT 408570
Query 118834 CCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 118891
| || ||||||||| | || |||| ||||| ||||| | || | |||||| | |||
Sbjct 408571 CTTTATAAAGCATGAAGGGGTTCCCAGTCTCTGTTTGAGCCTCCAAAATAGCATACCA 408628
>seq2228
Length=283306
Score = 145 bits (160), Expect = 9e-30
Identities = 284/418 (68%), Gaps = 4/418 (1%)
Strand=Plus/Minus
Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787
|| || ||||||||||||||||||||||| ||||| ||| |||| ||| || ||||||
Sbjct 201894 TAATCACCAACCCGCTTCTCGAAGAAGTTGGTCTTGCCGGCCAACGAGATGTTATCCATA 201835
Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAA--TTGCTGGCACTCCAATCTGTTTGAGGAGAC 129845
|| ||||||||||| | | || | | || || | | || | || || |
Sbjct 201834 AAGTCAAATGGGTTGGTGGCATTGTAGAACTTTTTGTTGCCCAAAGCAACA--AGCAGTC 201777
Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905
|| | || |||| || || | |||| || || |||||| || | ||| ||
Sbjct 201776 TGTCGGCAACAAACTCGATATATTGGCACATGAGCTTGGCGTTCATGCCAAGAAGGGCAC 201717
Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965
|||| || || || | ||| |||||||||| || || || || | |||||| |
Sbjct 201716 ATGGAAGAGCATCAGTTAAGAATTCCTTCTCAATCTCAACTGCCTCTGTGATGATGGCCT 201657
Query 129966 GAATGGTCTCCGTGCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTCCT 130025
|| || | | ||| || | || ||| | |||||| |||||| ||
Sbjct 201656 CAACGGCCGAAGGGCCGGGGCGATGGCGGAGGTGGGAGAAGAGGAGGCAGGCAAAGTCGG 201597
Query 130026 GGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGAC 130085
||||||||||||||||||||| || | ||||||||| || ||||| ||||| || |
Sbjct 201596 TGTGGAGACCCTCGTCACGGGAAATCAATTCATTCGAAAAAGTGAGACCGGGCATAAGGC 201537
Query 130086 CCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143
| || ||||||||||||||||| | | || |||||| ||||||||| || || ||
Sbjct 201536 CACGTTTCTTCAACCAGAAAATAGAAGCGAAAGAGCCACTGAAGAAGATACCTTCAAC 201479
>seq4759
Length=494668
Score = 96.9 bits (106), Expect = 4e-15
Identities = 327/501 (65%), Gaps = 25/501 (5%)
Strand=Plus/Minus
Query 14065 ATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGC 14124
|||||| || || || || | | ||| | |||||| | ||| | ||| || | ||
Sbjct 212480 ATCAAATCGTCCAGGACGCATCAAGGCCTTGTCAAGCACATCCGGTCTGTTAGTACCGGC 212421
Query 14125 GATGACAACGA--TGCCCGTCTCGTTATCAAAGCCATCCATCTCAGTCAAGAGTTGATTG 14182
|| ||| || | ||| || | ||| || || |||||||| ||||| | ||||||
Sbjct 212420 GAGGACGACCACCTGCTCGGATG--TATTGAATCCGTCCATCTCGGTCAAAATCTGATTG 212363
Query 14183 ATGGTTTGTTCGCGTTCATCATTCGCAGGCATACCACCCGCA--CTGCGTTGCT------ 14234
| || ||| ||||| || || | ||||| | |||| |||||
Sbjct 212362 AGTGTGCTTTCTCGTTCGTCGTTACCG------CCACCGAAATTCTGCTTTGCTCTTGAT 212309
Query 14235 -TACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTTGATTTTCACGGGCAACT 14293
|||| | |||||||| || |||||||||| ||| || || ||| | || ||| |
Sbjct 212308 TTACCAATAGCGTCAATCTCGTCGATGAAAATGATGCACGGGGTATTCTTTCGCGCAGTT 212249
Query 14294 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGG-- 14351
|||| | ||| ||||| | | ||| ||||| |||||||||||||| || | |
Sbjct 212248 GCAAAAAGATCACGCACGCGAGATGGACCAACACCGACAAACATCTCCACGAATTCAGAA 212189
Query 14352 CGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCCGCGATGGCTCGGGCGAGGAGGG 14411
| | | ||| || | ||| || ||| |||||||| || |||| ||| || | |
Sbjct 212188 CCACTG-ACACTGTA-GAAAGGAACGCCCGATTCACCAGCTGTGGCCTTGGCCAGCAACG 212131
Query 14412 TCTTCCCCGTCCCTGGTTTCCCTGCGAGAAGGGCACCACGTGGGATCCTGGCACCACTGC 14471
|||| || || || || |||| | | |||||||| || ||| | |||||| ||
Sbjct 212130 TCTTACCGGTACCCGGGGGTCCTGATAAGATAGCACCACGAGGAATCTTCGCACCA-AGC 212072
Query 14472 CAAAGTAGC-GTTCAGGTTGTTTAAGGAAGTCCACGATTTCTTCCAATTCATCCTTCGCG 14530
| | | | | ||||||| || |||||| |||| ||| | |||| |||| ||
Sbjct 212071 CTTTGGAACTGCTCAGGTTTCTTGAGGAAGCTAACGAATTCCATAATTTCAACCTTGGCT 212012
Query 14531 GCGTCGATGCCTTCAACGTCA 14551
|||| ||||| ||||||||
Sbjct 212011 TCGTCCATGCCAGCAACGTCA 211991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618397699635560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |