Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3934 89.7 6e-13 >seq3934 Length=413549 Score = 89.7 bits (98), Expect = 6e-13 Identities = 463/726 (64%), Gaps = 32/726 (4%) Strand=Plus/Minus Query 104888 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAGAC 104947 ||| | |||||| | || ||||||| |||||||| | || | ||||||||| ||||| Sbjct 408628 TGGTATGCTATTTTGGAGGCTCAAACAGAGACTGGGAACCCCTTCATGCTTTATAAAGAT 408569 Query 104948 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGT 105007 || || |||| |||||||| ||||| || | || || ||| ||||| | || Sbjct 408568 GCGTGCAACCGCAAGAGTAACCAAAAAAACCTTGGAACTATTCGGAGCTCCAACTTGTGC 408509 Query 105008 ACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATC 105067 || |||||| | || | || | || || || || || || | || || | Sbjct 408508 ACGGAAATCATCGAGTACACCGCGCCGGACGAAGTCGCAGTTTGCAATTTGGCGTCCCTT 408449 Query 105068 GCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATT-TGATTATGAAAAACTCCACGA 105126 ||| | |||| ||||| ||||| | | | | | ||| | || | | | || || Sbjct 408448 GCTTTGCCCACATATGTCGATCCTGTC-CGGGGCGAGTATGACTTTGGGAGATTGCATGA 408390 Query 105127 AGTTACGAAAAC---TGTCACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCC 105183 ||| || || ||| ||| | |||||| | ||||| | ||| || || Sbjct 408389 AGTCACACAAGTCCTTGTTCTCAA---CTTAAACAAGATCATTGACAACAATCACTATCC 408333 Query 105184 CGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGG 105242 ||| ||| || | || ||| | | || ||||| |||| | ||||| |||| Sbjct 408332 CGTCCCAGAA-GCCAGGAAGAGTAACTTCCGTCATCGTCCTATTGCGGTGGGTGTGCAGG 408274 Query 105243 GTCTCGCGGATGTATTCATTCTTTGTCGCCACG-----CATTTGATTCCGACGAAGCGAA 105297 | ||||| |||| | ||| ||| ||| || | ||||| || || || || Sbjct 408273 GACTCGCTGATG----CTTTCCTTG-CGCTGCGATTGCCGTTTGACTCGCCTGAGGCAAA 408219 Query 105298 GGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGA 105357 | | | ||| | || || || || || || || || ||||| ||| || || Sbjct 408218 GCAGTTGAATATTCAAATCTTCGAAACAATCTACCATGCAGCTCTGACCGCGTCTTGTGA 408159 Query 105358 GTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGT 105417 | || ||||||||||||| |||||||| | ||| |||||||| | || ||| |||| Sbjct 408158 CATAGCCAAGGTTGATGGTCCTTATGAAACTTATGAAGGTTCTCCCGTTT--CAAAGGGT 408101 Query 105418 GCTT--CAATTTGATATGTGGGAAGGTGA----GACCAAGCTTCACTACGACTGGGAAGC 105471 ||| || | ||||||| |||| |||| ||| | ||| | |||||||| | Sbjct 408100 ACTTTGCAGTACGATATGT-GGAACGTGACTCCGACTGACCTT---TGGGACTGGGACAC 408045 Query 105472 TCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCC 105531 |||||| | ||| | | ||| | || |||||| | || | ||||| ||||| Sbjct 408044 CCTCAAGAAGGATATCGCAAAACACGGTGTACGCAACAGTTTACTTGTTGCTCCGATGCC 407985 Query 105532 AACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAA 105591 || ||| ||| || ||| | ||| || ||||| ||||| || ||||| | || Sbjct 407984 TACTGCCAGCACGAGTCAGATCCTCGGTTTCAACGAATGTTTTGAGCCATACACATCAAA 407925 Query 105592 CATCTA 105597 |||||| Sbjct 407924 CATCTA 407919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583225432523240