Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq2228 120 3e-22
seq4416 102 9e-17
seq3760 86.0 7e-12
>seq2228
Length=283306
Score = 120 bits (132), Expect = 3e-22
Identities = 107/133 (80%), Gaps = 1/133 (1%)
Strand=Plus/Minus
Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843
||||||||||||||||| | || || |||||||| ||||| ||||||||||| || ||
Sbjct 201573 ATCAATTCATTCGAAAAAGTGAGACCGGGCATAAGGCCACGTTTCTTCAACCAGAAAATA 201514
Query 74844 GCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGC 74903
| | ||| || |||||||||||||| ||||| || |||||||| || ||||||||
Sbjct 201513 GAAGCGAAAGAGCCACTGAAGAAGATACCTTCAACGGCTGCAAAGGCAACCAGGCGTTGG 201454
Query 74904 GCGAACGGTGCAT 74916
||||| |||| ||
Sbjct 201453 GCGAA-GGTGGAT 201442
>seq4416
Length=140045
Score = 102 bits (112), Expect = 9e-17
Identities = 189/271 (70%), Gaps = 6/271 (2%)
Strand=Plus/Minus
Query 152797 CCGTCAAGATCCGCGTCGGTCATGATCATCAGACGACCGTAGCGCAGGTCACGTAGTGAC 152856
|||||| | ||| || ||||||||||| ||| |||| || || ||| |||| ||||
Sbjct 48784 CCGTCATGGTCCTGATCAGTCATGATCATGAGATGACCATAACGAAGGCCACG-AGTG-T 48727
Query 152857 CCGTAGA--CCTTTCCATGTTGAAGCCCGAGGATCTTTTTGAGGTTGGAAAATTCCTCAT 152914
| ||| | |||| |||||| || ||||||| ||||||| ||| || |||| |
Sbjct 48726 CTGTATACTCCTTCTTATGTTGTAGGCCGAGGAAATTTTTGATGTTTTGAATCTCCTGGT 48667
Query 152915 TATCGGTCACCTGTTTCACCGTGGCATCCCGAACATTGCGCGGCTTTCCCCGGAGTGGAA 152974
| | || | || | || | ||||| || |||||| || ||||||| || | ||| |
Sbjct 48666 TCTTGGAAATTTGGTCAACGGAAGCATCACGGACATTGAGCAGCTTTCCTCGCAATGGGA 48607
Query 152975 ACACGCCGAACGCGTTGCGGCCTACAAC-GCTCAGACCGGCAATAGCAAGGGCTTTCGCC 153033
| ||||| || | | | || || || | || | || || || ||||| |||| ||
Sbjct 48606 AAACGCCAAAGAGATCGGGTCCAACTACAGATCTG-CCCGCCATTGCAAGACCTTTGGCG 48548
Query 153034 GAGTCACCCTCGGTGATAATAAGCGTACAGT 153064
|| || || ||||||| ||| ||||| ||||
Sbjct 48547 GAATCCCCTTCGGTGAGAATCAGCGTGCAGT 48517
>seq3760
Length=8275
Score = 86.0 bits (94), Expect = 7e-12
Identities = 133/185 (72%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 124712 CTCGTGGTTGAACAGAATGCCAGTACAC-GCAAACATCCCGTACGACTCGCGGTAGTTTT 124770
||||||||||||||| ||||| | ||| | || || || || || ||||||||
Sbjct 5501 CTCGTGGTTGAACAGGATGCC-GCTCACTCCGAAGATGCCATAGCTTTCACGGTAGTTCA 5559
Query 124771 TCGTCATCCAATACCCAAAGAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGG 124830
|||||||| | || ||||||||| |||||| ||||| || || |||||||| || |
Sbjct 5560 CAGTCATCCAGTGGGCATAGAGCTTGGCCACGCCGTAGGGACTGCGCGGGTAGAAAGGCG 5619
Query 124831 TGTTTTC-ATTTTGGGTAGGTTGCTGAATCTTCCCAAACATCTCCGAAGTACCCGCCTGA 124889
|| |||| | || || | | ||| | | || |||||||| || || | |||||||
Sbjct 5620 TGCTTTCGACTTGCGGCACG-GCCTGCACCAGACCGAACATCTCGGACGTGCTCGCCTGA 5678
Query 124890 TAGAA 124894
|| ||
Sbjct 5679 TAAAA 5683
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547182818189800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |