Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq3060 134 9e-27 >seq3060 Length=205498 Score = 134 bits (148), Expect = 9e-27 Identities = 147/193 (76%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574 ||| || |||||||| || ||||| || || || |||| || || ||||| |||||||| Sbjct 122845 CTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAA 122786 Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGA 34634 || |||||||| ||||| || || | ||||||||||||| ||| || ||||| ||| Sbjct 122785 AATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT-TGAATCTTAGTTTTGACGT 122727 Query 34635 T-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCA 34693 | ||||||||| ||| ||||| | || || ||||| ||||| || || |||| Sbjct 122726 TGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCA 122667 Query 34694 CAAAAATCTGCAT 34706 ||||||||||||| Sbjct 122666 CAAAAATCTGCAT 122654 Score = 127 bits (140), Expect = 1e-24 Identities = 169/232 (73%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 34476 GTCGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC 34535 || |||||| | | | ||| |||||||| |||||||| ||||| || ||||||||||| Sbjct 123112 GTTGCCGCCGCGCAATCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATC 123053 Query 34536 TGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGG 34595 || ||||| || | || ||||| || || || ||||| || | ||||||||||| || Sbjct 123052 GGAGAGTGTCCGACCATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGG 122993 Query 34596 CGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCT 34654 || | || || || ||| ||| ||| || |||||| | || |||||| || Sbjct 122992 TGGGATACCTTCTTTATCT-TGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACT 122934 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | || |||| || || || || |||||||| || || |||||||| ||||| Sbjct 122933 CGACCTCCAATGTAATAGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| || | ||||| || || || ||||| || ||||| ||||| ||| Sbjct 122360 CCACCACGAAGGCGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAA 122301 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | |||||||| |||||||| || || || || || || ||||| || || Sbjct 122300 AGAGTACGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGG 122241 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658 | ||||||||||||| |||| ||||| || || | || || || || ||| || Sbjct 122240 ATTCCCTCCTTGTCTTGGATC-TTTGTCTTCACATTGTCGATAGTATCACCGGACTCAAC 122182 Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | ||| || || || || || || || || |||||||||||||| Sbjct 122181 CTCAAGGGTGATGGTCTTGCCAGTCAAAGTCTTGACAAAAATCTGCAT 122134 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || |||| ||||| | || | ||||||||| |||||||| ||||||||||| || Sbjct 122652 CCACCTCGGAGACGGAGGACAAGATGGAGAGTAGATTCCTTTTGGATGTTATAATCAGAG 122593 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | || ||||||||||| || || || || || || || || || || || Sbjct 122592 AGAGTGCGACCATCCTCAAGTTGTTTGCCAGCGAAAATCAAGCGTTGCTGATCTGGAGGG 122533 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA 34636 | |||||||| || ||| || ||||| ||| || Sbjct 122532 ATGCCCTCCTTATC-CTGAATCTTGGTTTTCACGTTA 122497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314710992694283