Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_028892.1
Length=49949
Score E
Sequences producing significant alignments: (Bits) Value
seq3296 125 2e-24
seq3761 109 2e-19
>seq3296
Length=739
Score = 125 bits (138), Expect = 2e-24
Identities = 352/534 (66%), Gaps = 15/534 (3%)
Strand=Plus/Plus
Query 3420 CTCCAGCCGGGCGACGAGATCGTCCTCGGCTTCGACGGTGGCAAGACGCACGACGCGACC 3479
|| ||||| |||||| |||||| |||| |||||||| |||||||| ||||||||||
Sbjct 157 CTTCAGCCCGGCGACACCATCGTCATCGGGTTCGACGGCGGCAAGACAGACGACGCGACA 216
Query 3480 GCGCTGGTCGCGATCCGCGTGCGTGACATGGCCGCCTTCCTGCTCGGCCTCTGGGAGAAG 3539
||| | |||| | ||||| ||| | ||| | |||||| |||||||||||
Sbjct 217 GCGATCATCGCTCTTCGCGTCGCCGACCGGCTCGCGCAGCCGCTCGGGATCTGGGAGAAG 276
Query 3540 CCGGATGGCCCGCAGGGTGACAACTGGGAGGTTCCTCG-CTGGGAGGTTGACTCCGAG-- 3596
|| || ||||| | || | |||||||||| ||| | || | | | ||||
Sbjct 277 CCCGAGGGCCCTCTCGGCAAGAACTGGGAGG----TCGACAGGATCGCCGTCGGCGAGCT 332
Query 3597 -GTGCACAGCGCCTTCAAGCAGTTCAAGGT-GCAGGCGTTCTACGCCGACGTTGCGCTGT 3654
|| | ||||||| | || | | || | ||| |||| ||||||||| ||| |
Sbjct 333 CGTCGAGCACGCCTTCGGGACGTACGACGTCGTCGGC-TTCTTCGCCGACGTCAAGCTCT 391
Query 3655 GGGAGTCCTACATCTCCGAGTGGTCCGAGACCTACGGGGACAGCCTGGTGGTGAAGTCG- 3713
|||||||||||||| | ||||| |||| |||| ||| | || |||||||| ||
Sbjct 392 GGGAGTCCTACATCGACACCTGGTCGGAGAAGTACGCCGACCGGCTCCTGGTGAAGGCGA 451
Query 3714 CCGGTCGGTCGCGACGCGATCGGCTTCGACATGCGCTCCTCGCTGAAGCTGGTGACCATG 3773
|| ||||| || |||||| |||||||||| | | | || | | |||| |
Sbjct 452 CCCCGAAGTCGC----CGGTCGGCTACGACATGCGCGGCCACCAGCAGGAGCTCACCAAG 507
Query 3774 GCGCATGAGCGCCTGATGCGGTCCATCTTCGACGGCAAGCTCGCCCACGACGGCGACCGC 3833
|| || ||| | | | | ||| ||| || || ||| || | | |
Sbjct 508 GCCACCGAAGCCCTCGTCCAGGCGATCGAGGACCAGCAGATCCGGCACACCGACCATGCC 567
Query 3834 TCGCTTCGTCGGCACGCGCTGAACGCGCGTCGCCGCACCAACAACTACGGCGTGTCCTTC 3893
|||| ||||||| |||| || || ||| ||||| | ||||| ||||
Sbjct 568 GCGCTGAACCGGCACGTCGGGAACTGCCGCCGGCGCCCCAACCGGTGGGGCGTCAGCTTC 627
Query 3894 GGCAAGGAGTCGAGGGAGTCGCCCCGCAAGATCGACGCCTACGCGGCGCTGATG 3947
|||||||| || ||||||||||| ||| |||||| || ||||||| || ||
Sbjct 628 GGCAAGGAATCCAGGGAGTCGCCGAAGAAGGTCGACGGCTTCGCGGCGTTGCTG 681
>seq3761
Length=1757
Score = 109 bits (120), Expect = 2e-19
Identities = 165/233 (71%), Gaps = 4/233 (2%)
Strand=Plus/Minus
Query 38998 CCGTACGTCGCGATCTGTGCGACCTTGTCACTGCCGTACTTCTCGGTGACGTACCGGATC 39057
||| | ||||||||||| ||| || | ||||||||| || | |||||| |||
Sbjct 697 CCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGATG 638
Query 39058 ACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACACGCT 39115
|| | | ||| | | | || |||||||||||| | ||| ||||| || || ||||
Sbjct 637 ACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCGCT 580
Query 39116 CAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGATCC 39175
| ||||||||||| |||||||| | || || ||| ||| || ||||||||||||
Sbjct 579 CCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGATCT 520
Query 39176 CGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCGCGCCCAGGGCCGACC 39228
||| | || || ||||||| || || | || || || || |||||||||
Sbjct 519 TGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACC 467
Score = 104 bits (114), Expect = 7e-18
Identities = 101/130 (78%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 38118 CTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGGAGGTCGGCCTGACC 38177
|| ||||| | |||||| ||||||||||||||| || || || || ||||| || ||
Sbjct 1622 CTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGCC 1563
Query 38178 GAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAG 38237
|| ||||| ||| ||||||||||||| | || | |||||| |||||||||| ||||
Sbjct 1562 CAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGAT 1503
Query 38238 CCCGAAGGTC 38247
||| |||||
Sbjct 1502 TCCGTAGGTC 1493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 159705999506082
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |