Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028910.1 Length=55617 Score E Sequences producing significant alignments: (Bits) Value seq4176 255 2e-63 >seq4176 Length=744 Score = 255 bits (282), Expect = 2e-63 Identities = 292/387 (75%), Gaps = 18/387 (5%) Strand=Plus/Plus Query 42709 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 42768 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 42769 AACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG 42828 ||| |||||||| ||||||||||| | || || ||| | ||||| || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 42829 CCCGGGCGGATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACC 42885 || || ||| | |||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 42886 GGCGCCGGCGTGCCCACCGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGC 42942 |||| || ||||| ||||| |||||||||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 42943 AAACACGGCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAAC 43002 ||||||||| | | | | ||||||||||||||||| ||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 43003 AACCAGACGTACCGGCTGGGCTGGT-CAGAGCAGTGC--AAAGACGCCACCAAGATGGGG 43059 |||||||| ||||| ||| | || ||| | ||| || |||| ||| |||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGC 353 Query 43060 GTCGGCTCCCCGGAATACGTTCTGCTG 43086 |||| ||| |||||||| |||||| Sbjct 354 TGCGGCAGCCCCGAATACGTGCTGCTG 380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 177842554678298