Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028946.1 Length=59652 Score E Sequences producing significant alignments: (Bits) Value seq4176 241 5e-59 >seq4176 Length=744 Score = 241 bits (266), Expect = 5e-59 Identities = 298/398 (75%), Gaps = 16/398 (4%) Strand=Plus/Plus Query 45638 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 45697 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 45698 AACGAGCACTTCTGGCAGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCTCG 45757 ||| ||| |||| ||||||||| | || || ||| | ||||| || || || Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 45758 CCGGGCCGTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGAAACGTCACC 45814 |||||||| | |||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 45815 GGCGCCGGCGTGCCCACGGTGTCCCCGTTCCACGCCGAGGCGATCTTCCAC-GGACGCAA 45873 |||| || ||||| || || |||||||||||| || ||| ||| | || Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGC-G 238 Query 45874 ACACGGCTTCGACTACCTCGGCATGATCACCGTCGTCACCGATGTGGTCCGGGAAAACAA 45933 ||||||||| | | | | ||||||||||||||||||||||| || || || || ||||| Sbjct 239 CCACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAACAA 298 Query 45934 CCAGACGTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGGCG 45989 |||||| ||||| ||| | || | ||| || ||| || |||| ||| ||||||||| Sbjct 299 CCAGACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGGCT 354 Query 45990 TCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCG 46027 |||| ||| |||||| | |||||| | | ||| ||| Sbjct 355 GCGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCCG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190753810874468