Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028976.1 Length=50113 Score E Sequences producing significant alignments: (Bits) Value seq3296 131 5e-26 seq3761 125 2e-24 >seq3296 Length=739 Score = 131 bits (144), Expect = 5e-26 Identities = 350/532 (66%), Gaps = 11/532 (2%) Strand=Plus/Plus Query 3647 CTCCAGCCGGGCGACGAGATCGTCCTCGGCTTCGACGGTGGCAAGACGCACGACGCGACC 3706 || ||||| |||||| |||||| |||| |||||||| |||||||| |||||||||| Sbjct 157 CTTCAGCCCGGCGACACCATCGTCATCGGGTTCGACGGCGGCAAGACAGACGACGCGACA 216 Query 3707 GCGCTGGTCGCGATCCGCGTGCGTGACATGGCCGCCTTCCTGCTTGGCCTCTGGGAGAAG 3766 ||| | |||| | ||||| ||| | ||| | ||| || ||||||||||| Sbjct 217 GCGATCATCGCTCTTCGCGTCGCCGACCGGCTCGCGCAGCCGCTCGGGATCTGGGAGAAG 276 Query 3767 CCAGACGGCCCGCAGGGCGACAACTGGGAGGTCCCTCGCTGGGAGGTCGACTCCGAG--- 3823 || || ||||| | ||| | |||||||||||| | || | || | |||| Sbjct 277 CCCGAGGGCCCTCTCGGCAAGAACTGGGAGGTC---GACAGGATCGCCGTCGGCGAGCTC 333 Query 3824 GTGCACAGCGCCTTCAAGCAGTTCAACGTCCAGGTGTTCTACGCCGACGTTGCGCTGTGG 3883 || | ||||||| | || | ||||| | |||| ||||||||| ||| ||| Sbjct 334 GTCGAGCACGCCTTCGGGACGTACGACGTCGTCGGCTTCTTCGCCGACGTCAAGCTCTGG 393 Query 3884 GAGTCCTACATCTCCGAGTGGTCCGAGACCTACGGGGACAGCCTGGTGGTGAAGTCG-CC 3942 |||||||||||| | ||||| |||| |||| ||| | || |||||||| || || Sbjct 394 GAGTCCTACATCGACACCTGGTCGGAGAAGTACGCCGACCGGCTCCTGGTGAAGGCGACC 453 Query 3943 GGTCGGTCGCGATGCGATCGGCTTCGACATGCGCTCCTCGCTGAAGCTGGTGACCATGGC 4002 ||||| || |||||| |||||||||| | | | || | | |||| ||| Sbjct 454 CCGAAGTCGC----CGGTCGGCTACGACATGCGCGGCCACCAGCAGGAGCTCACCAAGGC 509 Query 4003 GCATGAGCGTCTGATGCGGTCCATCTTCGACGGCAAGCTCGCCCACGACGGCGACCGCTC 4062 || || | | | | ||| ||| || || ||| || | | | | Sbjct 510 CACCGAAGCCCTCGTCCAGGCGATCGAGGACCAGCAGATCCGGCACACCGACCATGCCGC 569 Query 4063 GCTTCGTCGGCACGCGCTGAACGCGCGTCGCCGCACCAACAACTACGGCGTGTCCTTCGG 4122 ||| ||||||| |||| || || ||| ||||| | ||||| |||||| Sbjct 570 GCTGAACCGGCACGTCGGGAACTGCCGCCGGCGCCCCAACCGGTGGGGCGTCAGCTTCGG 629 Query 4123 CAAGGAGTCGAGGGAGTCGCCCCGCAAGATCGACGCCTACGCGGCGCTGATG 4174 |||||| || ||||||||||| ||| |||||| || ||||||| || || Sbjct 630 CAAGGAATCCAGGGAGTCGCCGAAGAAGGTCGACGGCTTCGCGGCGTTGCTG 681 >seq3761 Length=1757 Score = 125 bits (138), Expect = 2e-24 Identities = 170/235 (72%), Gaps = 4/235 (2%) Strand=Plus/Minus Query 39429 TGCCGTACGTCGCGATCTGTGCGACCTTGTCGCTGCCGTACTTCTCGGTGACGTACCGGA 39488 ||||| | ||||||||||| ||| |||| ||||||||| || | |||||| || Sbjct 699 TGCCGAAGGTCGCGATCTGGCTGACGGCCTCGCGGCCGTACTTGTCCTTCACGTACTCGA 640 Query 39489 TCACGTCGCCACGGC--GACGGTCATCGAAGTCGATGTCCACGTCGGGCATGGAGACGCG 39546 | || | | ||| | | | || |||||||||||| | ||| ||||| || ||||| Sbjct 639 TGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGCG 582 Query 39547 CTCAGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGAGGGATGGGGTCCAGGTCGGTGAT 39606 ||| ||||||||||| |||||||| | || || ||| ||| || ||||||||||| Sbjct 581 CTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGAT 522 Query 39607 CCCGAGGGCGTACGCGGCCAGCGAGCCAGCCGCAGAGCCACGCCCAGGGCCGACC 39661 | ||| | || || ||||||| || || | || ||||| || ||||||||| Sbjct 521 CTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACC 467 Score = 104 bits (114), Expect = 7e-18 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 38551 CTTGGCCAGCACCTCGGGCTTCTTCTTGCCCATGGCGCGACGGAGAAGGTCGGCCTGACC 38610 || ||||| | |||||| ||||||||||||||| || || || || ||||| || || Sbjct 1622 CTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGCC 1563 Query 38611 GAGGGTGTACCCGGCCAGGATCTGCGCCGCCTTCTGCACCTGCTCCTGGTAGATGATGAG 38670 || ||||| ||| ||||||||||||| | || | |||||| |||||||||| |||| Sbjct 1562 CAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGAT 1503 Query 38671 CCCGAAGGTC 38680 ||| ||||| Sbjct 1502 TCCGTAGGTC 1493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 160230769274650