Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_028986.1 Length=153401 Score E Sequences producing significant alignments: (Bits) Value seq1432 93.3 4e-14 seq3761 89.7 5e-13 >seq1432 Length=684 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 90639 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGTTGTCGCAGGTTCGA 90698 ||||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 119 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 60 Query 90699 ATCCTGTCACCCCGAC 90714 |||||||| |||||| Sbjct 59 ATCCTGTCTTCCCGAC 44 >seq3761 Length=1757 Score = 89.7 bits (98), Expect = 5e-13 Identities = 115/151 (76%), Gaps = 12/151 (8%) Strand=Plus/Plus Query 113699 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTA--CG-TCATGGGCATC-A 113754 ||||||||||||||| || | || || |||||||| |||| || ||| | || | | Sbjct 470 CGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAAGATCACCGA 529 Query 113755 CCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACCGC- 113813 |||||||| ||| || ||||| ||||| |||||||||||||| | |||||||| ||| Sbjct 530 CCTCGATC--CCC--TCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACCCGGAGCGCG 585 Query 113814 -CCCGACTTCCCCGACATCGACGTCGACTTC 113843 ||| | || ||| ||||| |||||||| Sbjct 586 TGTCGA--TGCCGGACTTCGACATCGACTTC 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 490725441831560