Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_029044.1 Length=154434 Score E Sequences producing significant alignments: (Bits) Value seq3761 86.0 6e-12 seq1432 86.0 6e-12 >seq3761 Length=1757 Score = 86.0 bits (94), Expect = 6e-12 Identities = 114/151 (75%), Gaps = 12/151 (8%) Strand=Plus/Plus Query 113100 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTA--CG-TCATGGGCATC-A 113155 ||||||||||||||| || | || || |||||||| |||| || ||| | || | | Sbjct 470 CGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAAGATCACCGA 529 Query 113156 CCTCGATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTTATCAACCCGGACCGC- 113214 |||||||| ||| || ||||| ||||| ||||||||||||| | |||||||| ||| Sbjct 530 CCTCGATC--CCC--TCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACCCGGAGCGCG 585 Query 113215 -CCCGACTTCCCCGACATCGACGTCGACTTC 113244 ||| | || ||| ||||| |||||||| Sbjct 586 TGTCGA--TGCCGGACTTCGACATCGACTTC 614 >seq1432 Length=684 Score = 86.0 bits (94), Expect = 6e-12 Identities = 65/76 (86%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 90722 ACGGGGTGTAGTTCAG--TGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 90779 ||||| |||| |||| ||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 119 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 60 Query 90780 ATCCTGTCACCCCGAC 90795 |||||||| |||||| Sbjct 59 ATCCTGTCTTCCCGAC 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494030841388240