Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_029093.1 Length=75796 Score E Sequences producing significant alignments: (Bits) Value seq4676 178 6e-40 seq2129 138 5e-28 >seq4676 Length=1063 Score = 178 bits (196), Expect = 6e-40 Identities = 241/333 (72%), Gaps = 5/333 (2%) Strand=Plus/Plus Query 66211 TCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAACGAGACCACCACGG 66270 |||||||| | ||| |||||||||| || | | |||| |||||||||||| | Sbjct 14 TCAACCAGATCCGCATGAAGATCGGCGTGATGTTCGGCAGCCC---CGAGACCACCACCG 70 Query 66271 GCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCG 66330 ||||||| || ||| ||||||||| || || ||| |||| |||| |||| || |||| Sbjct 71 GCGGCAATGCGCTGAAGTTCTACGCGTCCGTGCGCCTGGACATCCGCCGCACCGGCACCA 130 Query 66331 AGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAGAACAAGC 66390 ||| | ||||| ||||| |||||||| ||| ||| |||||||||||||||||| Sbjct 131 TCAAGAAGGGCGAGGAGGCGATCGGCAACGAGACCAAGGTCAAGGTCGTCAAGAACAAGG 190 Query 66391 TGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTG 66450 |||| || ||| | | || |||||| | || ||| ||| |||||||||||||| | Sbjct 191 TGGCGCCCCCGTTCAAGACGGCGGAGTTCGACATCCTGTTCGGCGAGGGCATCTCGCGCG 250 Query 66451 AGGTCGAACTCCTCGACCTGGCCGT-GTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGG 66509 | | ||| || ||||| ||| ||| ||| || | | ||||||| ||||||||| Sbjct 251 AAGGCGAGGTCATCGACATGGGCGTCAACGC-CCGCATCATCGAGAAGTCCGGCGCCTGG 309 Query 66510 TTCAAGTACGGGGACAAGAACGTCGCCCAGGGC 66542 | | ||| || | |||| ||| ||||||| Sbjct 310 TACGCCTACAAGGGCGAGAAGATCGGCCAGGGC 342 >seq2129 Length=790 Score = 138 bits (152), Expect = 5e-28 Identities = 184/256 (72%), Gaps = 0/256 (0%) Strand=Plus/Minus Query 66264 ACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATC 66323 ||||| |||||||| || ||| |||||||| || ||||| | || || || |||||| Sbjct 790 ACCACCGGCGGCAATGCGCTGAAATTCTACGCGTCCGTCCGTCTCGACGTGCGCCGCATC 731 Query 66324 GCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGTCGTCAAG 66383 | | | | ||||| |||| || || |||||||| ||||| |||||||| || ||| Sbjct 730 GGCTCGGTCAAGGACCGCGAGGAAGCGACCGGCAACCAGACCCGCGTGAAGGTGGTGAAG 671 Query 66384 AACAAGCTGGCCCCGCCGCACCGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATC 66443 |||||| | || |||||| | | | ||| ||| | || ||| ||| |||||||| Sbjct 670 AACAAGGTCGCGCCGCCGTTCAAGCAGGTCGAATTCGACATCATGTTCGGTGAGGGCATT 611 Query 66444 TCGCGTGAGGTCGAACTCCTCGACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGC 66503 || || ||| || ||||||| | |||| | |||||||| ||||||||||| Sbjct 610 TCCAAGCTGGGCGAGATCATCGACCTCGGCGTGAAGGCCGGCCTGGTCGAGAAGTCGGGC 551 Query 66504 GCCTGGTTCAAGTACG 66519 ||||||||| |||| Sbjct 550 TCCTGGTTCAGCTACG 535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242408067608927