Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3711 109 5e-19 seq1411 86.0 6e-12 >seq3711 Length=1691 Score = 109 bits (120), Expect = 5e-19 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Plus Query 34548 GCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCC 34607 |||| |||||| | ||| |||| ||||||||| | || |||||| | ||| || Sbjct 1497 GCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCC 1556 Query 34608 AATTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGG 34667 | |||||||||||| | || ||||||| |||||||| || || || | ||||| Sbjct 1557 AGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCT 1616 Query 34668 GGTTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCA 34725 | || |||||||||||||| || || ||||| || |||||| |||||||||| || Sbjct 1617 TCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGCA 1674 Score = 109 bits (120), Expect = 5e-19 Identities = 131/178 (74%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 6620 TGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCC 6679 || |||||||||| |||||| || ||||| || || |||||||||||||| || | Sbjct 1674 TGCGCGATCATGTGCGTGAGTAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGAAG 1615 Query 6680 ATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTGG 6739 ||||| | || || || |||||||| ||||||| || | |||||||||||| ||| Sbjct 1614 ATGTCGGCACTGCGCTGGTACAGCTGGCACGACAGCTTGCCGTCCGCGACGTAGAACTGG 1555 Query 6740 CAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGC 6797 ||| | |||||| || | ||||||||| |||| ||| | |||||| |||| Sbjct 1554 AAGAACGCGTGGCAGGGCGCCAGCGCCATCTTCGGGATGTCCGCCACGTTCCAGGCGC 1497 >seq1411 Length=471115 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGT-TCCC 34380 || || ||||||||||||| ||||| ||| || | ||| ||| || ||| || | Sbjct 456234 GGTGTCAAGATCTGGGACGGCAACGGGAGTCGTGATTATCTCGAC-TCCGTCGGTCTCTC 456292 Query 34381 ATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGC 34440 | |||||| | ||||| ||||||| || ||||| || || ||| |||||||||| || Sbjct 456293 ACATCGGGAAGTAGGCGATCTGGGCCCCGTGTACGGATTTCAATGGCGACACTTTGGTGC 456352 Query 34441 GGAGTATCGGGGGAGCG-AAGCGGACTATTCGGGACAGGG 34479 |||| || || ||| ||||||||||| |||| |||| Sbjct 456353 ACAGTA-CGTGGATGCGAAAGCGGACTATACGGGGAAGGG 456391 Score = 86.0 bits (94), Expect = 6e-12 Identities = 118/160 (74%), Gaps = 4/160 (3%) Strand=Plus/Minus Query 6866 CCCTGTCCCGAATAGTCCGCTT-CGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924 |||| |||| ||||||||||| ||| || || |||| || |||||||||| ||| || Sbjct 456391 CCCTTCCCCGTATAGTCCGCTTTCGCATCCACG-TACTGTGCACCAAAGTGTCGCCATTG 456333 Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGA-ACCCCCGCTTGTCCA 6983 || ||||| || ||||||| ||||| | |||||| || || ||| || ||| | Sbjct 456332 AAATCCGTACACGGGGCCCAGATCGCCTACTTCCCGATGTGAGAGACCGACGGA-GTCGA 456274 Query 6984 GAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCC 7023 || | || ||| ||||| ||||||||||||| || || Sbjct 456273 GATAATCACGACTCCCGTTGCCGTCCCAGATCTTGACACC 456234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448235218488720