Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq3060 89.7 4e-13 >seq3060 Length=205498 Score = 89.7 bits (98), Expect = 4e-13 Identities = 170/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Minus Query 39039 TAACTAAAATTTATTCAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTT 39098 |||| ||||||| || || || | |||||| | || | ||| || || |||||| Sbjct 122897 TAACAAAAATTTG--CATACCACCGCGTAAGCGAAGGACGAGATGCAGTGTAGACTCTTT 122840 Query 39099 TTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAG 39158 || || || || || | || || || |||| || ||||||||||| ||||| || | Sbjct 122839 CTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAAAATCAA 122780 Query 39159 ACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCG-CCA 39217 |||||||||||| | || | | ||| |||| | ||| | | |||| ||| | | | Sbjct 122779 ACGCTGCTGGTCTGGTGGAATTCCCTCCTTGT-CTTGAATCTTAGTTTTGACGTTGTCGA 122721 Query 39218 CCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGA 39277 || || ||||| || || | |||||| ||||||| |||| || || ||||| | Sbjct 122720 TTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCACAAAAA 122661 Query 39278 TTTGCAT 39284 | ||||| Sbjct 122660 TCTGCAT 122654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429520204592963