Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 123 2e-23
>seq3060
Length=205498
Score = 123 bits (136), Expect = 2e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||||||||| || || ||| | || |||||||| ||||| || ||||| || || |
Sbjct 122654 ATGCAGATTTTTGTGAAGACCTTGACCGGAAAAACAATCACGCTTGAAGTAGAGTCTTCA 122713
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || | ||||| || ||| ||||| || || | || ||||| ||
Sbjct 122714 GACACAATCGACAACGTCAAAAC-TAAGATTCAAGACAAGGAGGGAATTCCACCAGACCA 122772
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||||| || |||||||||||||| || || |||| ||||| || || |||||
Sbjct 122773 GCAGCGTTTGATTTTTGCCGGCAAACAGCTCGAGGACGGTCGCACGCTATCAGACTACAA 122832
Query 23790 CATACAAAAAGAGTCCACATTACAT 23814
||| || |||||||| ||| | |||
Sbjct 122833 CATTCAGAAAGAGTCTACACTGCAT 122857
Score = 98.7 bits (108), Expect = 7e-16
Identities = 136/188 (72%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680
|||| || || ||||||||||| || ||||||||||| ||||| ||| | || || | |
Sbjct 122436 TCGTCAAGACTCTCACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCG 122495
Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739
| || | ||||| || ||| || || || || | || |||||||| || || ||
Sbjct 122496 ATAACGTGAAAAC-CAAGATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTG 122554
Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799
|| || || ||||||||||| || || | |||||| | ||||| ||||| |||||
Sbjct 122555 ATTTTCGCTGGCAAACAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAG 122614
Query 23800 GAGTCCAC 23807
|| || ||
Sbjct 122615 GAATCTAC 122622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337989616344308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |