Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq3060 123 2e-23 >seq3060 Length=205498 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||||||||| || || ||| | || |||||||| ||||| || ||||| || || | Sbjct 122654 ATGCAGATTTTTGTGAAGACCTTGACCGGAAAAACAATCACGCTTGAAGTAGAGTCTTCA 122713 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || || | ||||| || ||| ||||| || || | || ||||| || Sbjct 122714 GACACAATCGACAACGTCAAAAC-TAAGATTCAAGACAAGGAGGGAATTCCACCAGACCA 122772 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||||| || |||||||||||||| || || |||| ||||| || || ||||| Sbjct 122773 GCAGCGTTTGATTTTTGCCGGCAAACAGCTCGAGGACGGTCGCACGCTATCAGACTACAA 122832 Query 23790 CATACAAAAAGAGTCCACATTACAT 23814 ||| || |||||||| ||| | ||| Sbjct 122833 CATTCAGAAAGAGTCTACACTGCAT 122857 Score = 98.7 bits (108), Expect = 7e-16 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| || || ||||||||||| || ||||||||||| ||||| ||| | || || | | Sbjct 122436 TCGTCAAGACTCTCACGGGAAAGACTATCACTCTCGAGGTTGAATCCTCCGATACCATCG 122495 Query 23681 A-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTA 23739 | || | ||||| || ||| || || || || | || |||||||| || || || Sbjct 122496 ATAACGTGAAAAC-CAAGATTCAGGATAAGGAGGGCATCCCTCCAGATCAGCAACGCTTG 122554 Query 23740 ATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAA 23799 || || || ||||||||||| || || | |||||| | ||||| ||||| ||||| Sbjct 122555 ATTTTCGCTGGCAAACAACTTGAGGATGGTCGCACTCTCTCTGATTATAACATCCAAAAG 122614 Query 23800 GAGTCCAC 23807 || || || Sbjct 122615 GAATCTAC 122622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337989616344308