Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq3060 140 8e-28
seq4836 120 7e-22
seq2521 100 7e-16
>seq3060
Length=205498
Score = 140 bits (154), Expect = 8e-28
Identities = 155/207 (75%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| || || ||||| || |||| |||||||| | | |||
Sbjct 122355 ACGAAGGCGGAGAACCAAGTGAAGGGTAGATTCCTTCTGGATGTTGTAATCCGAAAGAGT 122296
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| |||||||| ||||| || ||||||||||| | ||||| ||||| || || || ||
Sbjct 122295 ACGGCCATCTTCAAGCTGTTTACCAGCGAAGATCAAGCGTTGCTGGTCAGGAGGGATTCC 122236
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||||||||||||| ||||||| ||||| || || || || || || |
Sbjct 122235 CTCCTTGTCTTGGATCTTTGTCTTCACATTGTCGATAGTATCACCGGACTCAACCTCAAG 122176
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
||||| |||||||| |||||||| ||
Sbjct 122175 GGTGATGGTCTTGCCAGTCAAAGTCTT 122149
Score = 123 bits (136), Expect = 6e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557
||||| || | || |||||| ||| || |||| || ||||||| | || | ||
Sbjct 123097 TCTCAATACCAAATGCAGAGTGCTTTCCTTCTGGATGTTATAATCGGAGAGTGTCCGACC 123038
Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617
||| || |||||||| ||||| ||||| ||||| ||||||||||| || |||||||| ||
Sbjct 123037 ATCCTCAAGCTGCTTTCCAGCAAAGATGAGTCGCTGTTGGTCGGGTGGGATACCTTCTTT 122978
Query 225618 GTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGAT 225677
||||| || || ||| || ||||| |||||||| | || || || || || ||
Sbjct 122977 ATCTTGAATTTTCGTCTTAACGTTGTCGATCGTGTCTGACGACTCGACCTCCAATGTAAT 122918
Query 225678 CGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||| || || || || | || | ||||||
Sbjct 122917 AGTCTTGCCGGTTAATGTCTTAACAAAAATTTGCAT 122882
Score = 86.0 bits (94), Expect = 1e-11
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| || || || || || ||||| || | ||||| || | | || | || ||
Sbjct 122865 AGGACGAGATGCAGTGTAGACTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCC 122806
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| ||||| || || || || || | || || ||||| || ||||| || |||||||||
Sbjct 122805 TCGAGCTGTTTGCCGGCAAAAATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCT 122746
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|| ||||| || || ||||| |||||||| | || || || | |||||| ||
Sbjct 122745 TGAATCTTAGTTTTGACGTTGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTT 122686
Query 225682 TTGCCCGTCAAAGTTTT 225698
|| || ||||| || ||
Sbjct 122685 TTTCCGGTCAAGGTCTT 122669
>seq4836
Length=199183
Score = 120 bits (132), Expect = 7e-22
Identities = 125/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
||||||| |||||||||| |||||| | || || || |||||||| |||||||| ||
Sbjct 162947 TTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAATC 162888
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
| || || ||||| || ||||| ||||||||||| ||||| || ||||||| |||
Sbjct 162887 AAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGTCG 162828
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| ||||| || ||||| || | ||||| |||||||| ||
Sbjct 162827 ATCGTGTCGCTGGACTCCACTTCAAGGGTGATAGTCTTGCCGGT 162784
>seq2521
Length=135005
Score = 100 bits (110), Expect = 7e-16
Identities = 94/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| ||||| || ||||| ||||| |||| ||||| || | | || | |||||
Sbjct 57587 AGGACGAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTACGGCCATCC 57646
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| |||||||| || |||||||| || ||||| ||||| || ||||| ||||||||||||
Sbjct 57647 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGAGGAATGCCTTCCTTGTCT 57706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192457080086594
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |