Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_030904.1 Length=38975 Score E Sequences producing significant alignments: (Bits) Value seq1408 89.7 1e-13 >seq1408 Length=4104 Score = 89.7 bits (98), Expect = 1e-13 Identities = 127/179 (71%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 6489 GTCTGGGGAACCAAAAAGGATATGCGAAAAGAAGCAGATGTTTTAGATAACTTGGAAGAT 6548 || |||||| | ||| ||| | || | ||||| || | ||||| | | ||||| Sbjct 3973 GTTTGGGGAGCGAAAGGAGATTTCCGGAGCGAAGCGGACCTATTAGAAGAGCTAGAAGAA 3914 Query 6549 GGCATTATCGACATCTACATGACTAAAGCAAATGTGGAAAGAGAAGAAATTCGCCGCATG 6608 ||||| || || || || ||||| ||||||||||| || |||||||| |||| | | Sbjct 3913 GGCATCATTGATATATATATGACAAAAGCAAATGTTGATCGAGAAGAAGTTCGTAAAAAG 3854 Query 6609 GTAGATGACGAAACCTGGTTCAGTGCGCAAAAAGCATTAGAAATCGGCTTCGCAACATC 6667 || |||| ||||| ||||| ||||| ||||| | ||||| ||||| || || || Sbjct 3853 GTTGATGCTGAAACATGGTTTAGTGCTTCTAAAGCTGTTGAAATTGGCTTTGCTACTTC 3795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124591222431294