Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3934 257 2e-63 >seq3934 Length=413549 Score = 257 bits (284), Expect = 2e-63 Identities = 607/905 (67%), Gaps = 24/905 (3%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 || |||||||| || |||| ||| | || || | ||| || ||||| | ||| | | Sbjct 408745 TCGAATTCATCACCGTAAACGTCAGCTAATCCTGACGCTTCGTTTGGACAAAACAAGGTC 408804 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || || | | || |||||| ||||| || ||||| || |||| ||||||| || Sbjct 408805 CAATCGCCGTTCTTCTCAACCCGCTTCATGAACAGATCGGGGGTCCAAAGAGCAAGGAAG 408864 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA---AGATCTAGGAACTCC 76696 ||||| |||| ||| ||| || ||||| | |||||| ||||||| ||||| Sbjct 408865 AGATCACGGGCTCTTACTTCCTCCTTTCCG---TGGTTTTTACGGAGATCTAAAAACTCG 408921 Query 76697 ATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCT 76756 | ||||| || ||||| ||||| ||||| || || | | || || ||||| || || Sbjct 408922 AAGATATCGGAGTGCCAAGGTTCAAGATAAATGGCAAAGGCGCCAGGCCGTTTGTTGCCA 408981 Query 76757 CCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTA 76816 || || || | ||||| || || || ||| | || | | ||| || | || |||||| Sbjct 408982 CCTTGGTCGACATATCGAGCTGTATTGTTAAAGACACGGAGCATGGGGACGATTCCGTTA 409041 Query 76817 GATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGG 76876 || | || |||||||| | ||| || ||| || |||||| | ||| || Sbjct 409042 GAGGAGCCGTTTGTTCCTGCAATGTAGGAGCCAGTCGCGCGAATACGATGGATATTAAGA 409101 Query 76877 CCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCC 76936 || || || || || | || || || ||||| ||| || | || || ||||| || Sbjct 409102 CCGATACCGCCAGCTGTCTTGGAAATCAGAGCGCAGGTCTTTAGAGTATCGTAGATACCA 409161 Query 76937 TCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTT 76996 || || ||||| ||| |||| | || ||||||||| | ||| || | || ||| Sbjct 409162 TCGATGCTATCTTCCTTCATATCAATGAGAAAACAGGAGGCCATCTGTGGTTGCGGTGTT 409221 Query 76997 CCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTAT 77056 || || || || | || || || ||||| || || |||| | ||| | ||||| || Sbjct 409222 CCCGCGTTGAAAAGAGTGGGGGAAGCATGTGTAAAATATTTCTGAGACATCAGATTATAC 409281 Query 77057 GTTTCAATAACTGCTTCTATATCCCATTG--ATGAATTCCTACAGCGACACGCATCAACA 77114 ||||| || | ||||| || | | | |||||| || || || |||||||| | || Sbjct 409282 GTTTCGATCGC--CTTCTCAATGTCTTCGCCATGAATGCCAACCGCAACACGCATAATCA 409339 Query 77115 TATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 77174 | || || || || || | ||| ||| ||| ||||| ||||| | || |||| Sbjct 409340 TGTGTTGCGGACGCTCAGCGACCTTGCCATTGATTCGCAACAGATATGACCTCTCTAAAG 409399 Query 77175 TTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAG 77232 |||| || || ||||| | || ||||| || | || |||| ||| ||||||| || Sbjct 409400 TTTTGAATCCGAAATACTGATAGTTGAAA--TCACGATCATAAACAATGGCCGAATTAAG 409457 Query 77233 TTTGTCCTTATATTTGGTAACAATATCCATGACAGTGGT-AGAAATAATTGG---AGATC 77288 || || || || ||||||| ||| | | | |||||| || || || || Sbjct 409458 TTCCTCGGCATGCTTCATAACAAT-TCCGTAGGTTTTTTGAGAAATCATAGGCGCAGGTC 409516 Query 77289 GTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTAC-GTCGCTAAATAGt 77347 | | |||||| || |||| |||| | | | ||| || || || | | || | || Sbjct 409517 GGTT---ATTTTTCGGGTTAATGTAGTGATAAAGGTCGTCAATGACCGAAGAGAACT-GT 409572 Query 77348 ttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCA 77407 ||||| || | ||||||||| || || ||||||||||| || || || || |||||||| Sbjct 409573 TTTTTGGTCTGCTTGTGTAGGTTGGACACGGCTATTCTGGCTGCAAGGATAGCATAGTCT 409632 Query 77408 GGATG 77412 || || Sbjct 409633 GGGTG 409637 Score = 107 bits (118), Expect = 3e-18 Identities = 197/288 (68%), Gaps = 3/288 (1%) Strand=Plus/Plus Query 75367 CTTATCCAACGTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACC 75426 || ||| | |||||| || ||||||| || |||| ||||||| ||||||||||| || Sbjct 407531 CTGATCAACCGTGAATTGGATGGGAGCTGAAGCTGCCATTGTACGGAGATAGTACATCCC 407590 Query 75427 AGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGG 75486 ||| || || |||| ||||||| ||||||||||| || | |||| | || Sbjct 407591 AGTCTTCAGGCCCAACTTCCATCCCGCAAAATGCATGCTGGTGATTTTGCCCATTGTAGG 407650 Query 75487 ATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGC 75546 || | ||| || || | || ||| |||||||||||| || || | ||||| || Sbjct 407651 CTCTTTGAGATGGATGTTGAGAGATTGAGATTGATCGATGAATGCGCCCCGGTCAGCAGC 407710 Query 75547 CATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATC 75606 ||| | || |||||| |||| | |||||||| | || ||| | | |||||| || Sbjct 407711 CATCTGAATGATGGTCCTTTGGGAGATTTCCCACACTGTCTTGTAGAGAGCTTTGATGTC 407770 Query 75607 ATCTGGAAGATTTG---TATTTTGAATGGATCCGCCATCAGATATAAT 75651 | || | ||| | | || || | || ||||| |||| ||||| Sbjct 407771 TGCAGGGATATTGGGGATGTTCTGGACTGAACCGCCGTCAGCAATAAT 407818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712891169440320