Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031074.1 Length=92580 Score E Sequences producing significant alignments: (Bits) Value seq3711 241 8e-59 >seq3711 Length=1691 Score = 241 bits (266), Expect = 8e-59 Identities = 394/560 (70%), Gaps = 32/560 (6%) Strand=Plus/Plus Query 820 TGGCAAGTCGAAGGATGATCGCACCGGCACCGGCACGCTGAGCAAGTTCGGCGCCCAGCT 879 ||||| | | ||| || |||||||| |||||||||| ||| ||||||| |||| | Sbjct 1147 TGGCACGCCCAAGACCGACCGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTACCAGAT 1206 Query 880 GCGGTACGACCTCACCGAGGGCTTCCCGCTGGTCACCACGAAGCGCGTCCACTTCAAATC 939 ||||| |||||| | ||| |||||||||||||| ||||| ||| |||||| | ||||| Sbjct 1207 GCGGTTCGACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATC 1266 Query 940 GGTTGCGTACGAACTTCTGTGGTTCCTC-AGTG-----GCGACACGAACGTGAAGGCGCT 993 | |||| || ||||||||||| || | |||||| ||| ||| || Sbjct 1267 CATCATCCACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAAC---AAGCTGCG 1323 Query 994 CAACGACAACGGCGTCACCATCTGGGACGAGTGGGC---CGACGCCGGCGGAAACCTCGG 1050 | || |||||| |||||||||||||| ||||| ||| | ||||| |||| || Sbjct 1324 C---GAGCGCGGCGTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCG---ACCTGGG 1377 Query 1051 TCCTGTCTACGGCGCGCAGTGGCGGCACTGGCATGTCGAGGACGGAGGATCGTCGTGGA- 1109 || || ||||||| ||||||||| ||||| ||| | || || || | | Sbjct 1378 GCCGGTGTACGGCGTGCAGTGGCGCAGCTGGC----CGACACCCGA----CGGCGGGCAC 1429 Query 1110 -TTGACCAGATCTCGGCCGCCGTGGAG--CTGCTTCGCGAGGACCCTGACTCGCGCCGGA 1166 | ||||||||| | | || ||| || | | || | | || ||||||||||| | Sbjct 1430 ATCGACCAGATCGCCGAAGCGGTGAAGACCATCAAGGCCA--ATCCGGACTCGCGCCGCA 1487 Query 1167 ACGTGGTATCCGCATGGAACGTCGGTGACCTCAGCGACATGGCACTTCACCCGTGCCACA 1226 | | || ||| |||||||| | ||| || | ||||| || || |||||| Sbjct 1488 TCATCGTCAGCGCCTGGAACGTGGCGGACATCCCGAAGATGGCGCTGGCGCCCTGCCACG 1547 Query 1227 TCATGTTCCAGCTGTACGTCGTCGACGGCCGGCTCTCGCTGCAGGTCTACCAGCGCAGCG 1286 | |||||| | ||||||| |||||| ||| ||| ||| | ||||||||||| | Sbjct 1548 CGTTCTTCCAGTTCTACGTCGCGGACGGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTG 1607 Query 1287 CGGACATGTTCCTCGGTGTGCCGTTCAATATCGCCTCGTACGCGCTCCTCGCGCACATGT 1346 | ||||| ||||| || ||||||||||| |||||| |||||||| ||| |||||||| Sbjct 1608 CCGACATCTTCCTGGGCGTGCCGTTCAACATCGCCAGCTACGCGCTACTCACGCACATGA 1667 Query 1347 TCGCGCAGCAGGCCGGCCTG 1366 ||||||||||| || |||| Sbjct 1668 TCGCGCAGCAGTGCGACCTG 1687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 296113692260751