Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_031078.1
Length=50082
Score E
Sequences producing significant alignments: (Bits) Value
seq3761 132 2e-26
seq3296 100 9e-17
>seq3761
Length=1757
Score = 132 bits (146), Expect = 2e-26
Identities = 175/236 (74%), Gaps = 10/236 (4%)
Strand=Plus/Minus
Query 40083 CCGAAGGTCCCGATCTG--TG-CGACCTTGTCCGCCCCGTACTTCTCGGTGACGTACCTG 40139
||||||||| ||||||| || || ||| | || || |||||| || | |||||| |
Sbjct 697 CCGAAGGTCGCGATCTGGCTGACGGCCTCG--CGGCC-GTACTTGTCCTTCACGTACTCG 641
Query 40140 ATCACGTCGCCCCG--TCGCCGGTCATCGAAGTCGATGTCAACGTCGGGCATGGACACGC 40197
|| || | |||| | ||| | || |||||||||||| | ||| ||||| |||||||
Sbjct 640 ATGACCCGGTCCCGGTTGGCCTGGCA--GAAGTCGATGTCGAAGTCCGGCATCGACACGC 583
Query 40198 GCTCGGGGTTCAGGAACCGCTCGAAGATGAGCCCGTGCGGGATGGGGTCCAGGTCTGTGA 40257
|||| ||||||||||| |||||||| | || || | ||| ||| || ||||| ||||
Sbjct 582 GCTCCGGGTTCAGGAAGCGCTCGAACAGCAGGTTGTACTGGAGGGGATCGAGGTCGGTGA 523
Query 40258 TGCCGAGGCAGTAGGCGACCAGCGAACCGGCAGCCGAGCCACGTCCGGGTCCGACC 40313
| ||| | ||||| |||||||| ||||| | || ||||| || || ||||||
Sbjct 522 TCTTGAGCGAATAGGCCACCAGCGATCCGGCGCCTGATCCACGGCCCGGGCCGACC 467
Score = 86.0 bits (94), Expect = 2e-12
Identities = 97/130 (75%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 39203 CTTGGCCAGAACCTCGGGCTTCTTCTTGCCCATGGCTCGGCGGAGAAGGTCGGCCTGACC 39262
|| ||||| |||||| ||||||||||||||| || ||||| || ||||| || ||
Sbjct 1622 CTGGGCCATCTCCTCGGCCTTCTTCTTGCCCATCGCCCGGCGCAGCAGGTCCGCGCCGCC 1563
Query 39263 CAGGCTGTACCCAGCGAGGATCTGTGCCGCCTTCTGCACCTGCTCCTGGTAGATGACCAG 39322
||| |||| || | |||||||| || | || | |||||| |||||||||| | |
Sbjct 1562 CAGCGTGTAGCCGCCCAGGATCTGCGCGGTCTGCATCACCTGTTCCTGGTAGACCATGAT 1503
Query 39323 CCCGTAGGTC 39332
|||||||||
Sbjct 1502 TCCGTAGGTC 1493
>seq3296
Length=739
Score = 100 bits (110), Expect = 9e-17
Identities = 213/318 (67%), Gaps = 20/318 (6%)
Strand=Plus/Plus
Query 3611 CTCCAGCCGGGTGACGAGATCGTCCTCGGCTTCGACGGTGGCAAGACGCATGACGCGACC 3670
|| ||||| || ||| |||||| |||| |||||||| |||||||| | ||||||||
Sbjct 157 CTTCAGCCCGGCGACACCATCGTCATCGGGTTCGACGGCGGCAAGACAGACGACGCGACA 216
Query 3671 GCCCTGGTCGCGATCCGCGTCCGCGACATGTGCGCGTTCCTCCTCGGTCTCTGGGAGAAG 3730
|| | |||| | |||||| |||| | |||| | ||||| |||||||||||
Sbjct 217 GCGATCATCGCTCTTCGCGTCGCCGACCGGCTCGCGCAGCCGCTCGGGATCTGGGAGAAG 276
Query 3731 CCAGACGGACCGCAGGGCGACAACTGGGAGGTGCCTCGCTGGGAG-GTCGACTCCGAG-- 3787
|| || || || | ||| | ||||||||||| || ||| | || | ||||
Sbjct 277 CCCGAGGGCCCTCTCGGCAAGAACTGGGAGGT----CGACAGGATCGCCGTCGGCGAGCT 332
Query 3788 -GTGCACAACGCCTTCAAGCAGTTCAACGTCCAGGTGTTCTACGCCGACGTTGCCCTGTG 3846
|| | |||||||| | || | ||||| | |||| ||||||||| || ||
Sbjct 333 CGTCGAGCACGCCTTCGGGACGTACGACGTCGTCGGCTTCTTCGCCGACGTCAAGCTCTG 392
Query 3847 GGAGTCGTACATCTCCGAGTGGTCTGAGACCTACGGGGATCAGCTCGCGGTGAAG----- 3901
|||||| |||||| | ||||| |||| |||| || | |||| |||||||
Sbjct 393 GGAGTCCTACATCGACACCTGGTCGGAGAAGTACGCCGACCGGCTCCTGGTGAAGGCGAC 452
Query 3902 -------TCGCCGGTCGG 3912
|||||||||||
Sbjct 453 CCCGAAGTCGCCGGTCGG 470
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 160131574989128
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |