Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq1432 93.3 4e-14 seq3761 91.5 2e-13 >seq1432 Length=684 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 95714 ACGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGA 95773 ||||| |||| |||| |||| ||||| ||||||||||||||||| ||||||||||||| Sbjct 119 ACGGGAAGTAGCTCAGCTTGGTAGAGCACTTGGTTTGGGACCAAGGGGTCGCAGGTTCGA 60 Query 95774 ATCCTGTCACCCCGAC 95789 |||||||| |||||| Sbjct 59 ATCCTGTCTTCCCGAC 44 >seq3761 Length=1757 Score = 91.5 bits (100), Expect = 2e-13 Identities = 113/150 (75%), Gaps = 10/150 (7%) Strand=Plus/Plus Query 120466 CGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTCACCTA--CG-TCATGGGCATCAC 120522 ||| |||||||||||||| | || || |||||||| |||| || ||| | ||||| Sbjct 470 CGGCCCGGGCCGTGGATCAGGCGCCGGATCGCTGGTGGCCTATTCGCTCAAG---ATCAC 526 Query 120523 CTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGATCGC-- 120580 | ||||||| || ||||| ||||| |||||||||||||| | |||||||| ||| Sbjct 527 CGACCTCGATCCCCTCCAGTACAACCTGCTGTTCGAGCGCTTCCTGAACCCGGAGCGCGT 586 Query 120581 CCCGACTTTCCCGACATCGACGTCGACTTC 120610 ||| | || ||| ||||| |||||||| Sbjct 587 GTCGA--TGCCGGACTTCGACATCGACTTC 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514992770232200