Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015-
11-03] 4,851 sequences; 27,454,949 total letters
Query= NC_031224.1
Length=59443
Score E
Sequences producing significant alignments: (Bits) Value
seq3711 181 4e-41
>seq3711
Length=1691
Score = 181 bits (200), Expect = 4e-41
Identities = 321/467 (69%), Gaps = 1/467 (0%)
Strand=Plus/Plus
Query 51798 GACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTC 51857
||||||| | ||||||||||| | |||||||||||||| || | ||| | ||
Sbjct 1214 GACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATC 1273
Query 51858 GGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGC 51917
||| |||||||||| || |||||| | || |||| | || | || ||||
Sbjct 1274 CACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGC 1333
Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977
|| | ||| ||||||||||||||| || | || ||||||| || ||||| || |
Sbjct 1334 GTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTG 1393
Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037
|||||||| || ||| | | |||| | |||||| |||||| |||| ||
Sbjct 1394 CAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGTG 1453
Query 52038 AAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097
|| | || ||| | |||| || || || ||| ||| || ||||| ||||
Sbjct 1454 AAGACCATCAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCG 1513
Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157
|| | | |||||| |||| |||||||| | | ||||| ||||| || || ||
Sbjct 1514 GACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCGGAC 1573
Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217
|| ||||| |||||||| |||| ||||| ||||||||| ||| ||||||| |||||
Sbjct 1574 GGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTC 1633
Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT 52264
||||| |||||||| | | || ||||| |||| || | ||||||
Sbjct 1634 AACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGC-AGCAGT 1679
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 190085049401110
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |