Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq3711 181 4e-41 >seq3711 Length=1691 Score = 181 bits (200), Expect = 4e-41 Identities = 321/467 (69%), Gaps = 1/467 (0%) Strand=Plus/Plus Query 51798 GACCTGAGTAAGGGCTTCCCGCTCATCACCACCAAGAAGGTGCATTTCCCATCAGTGGTC 51857 ||||||| | ||||||||||| | |||||||||||||| || | ||| | || Sbjct 1214 GACCTGAACGATGGCTTCCCGCTGGTGACCACCAAGAAGGTCCACCTGAAATCCATCATC 1273 Query 51858 GGGGAGTTGCTGTGGTTGCTTTCGGGCTCTACGAACGTCAACGATCTCCATAAGTACGGC 51917 ||| |||||||||| || |||||| | || |||| | || | || |||| Sbjct 1274 CACGAGCTGCTGTGGTTCCTGGAGGGCTCGAGCGACAACAACAAGCTGCGCGAGCGCGGC 1333 Query 51918 GTCAGCATTTGGGACGAATGGGCGGATGAAAATGGTAACCTGGGTCCTGTGTATGGTAAG 51977 || | ||| ||||||||||||||| || | || ||||||| || ||||| || | Sbjct 1334 GTGACCATCTGGGACGAATGGGCGCGCGAGGACGGCGACCTGGGGCCGGTGTACGGCGTG 1393 Query 51978 CAGTGGCGTAGTTGGGATGCTGGTGGCGGCAAGGTCATCGATCAGATCCATGAAGTCGTC 52037 |||||||| || ||| | | |||| | |||||| |||||| |||| || Sbjct 1394 CAGTGGCGCAGCTGGCCGACACCCGACGGCGGGCACATCGACCAGATCGCCGAAGCGGTG 1453 Query 52038 AAATCAATTAAGAACGATCCTGATAGTCGACGGCACATTGTCTCTGCTTGGAATGTGGGT 52097 || | || ||| | |||| || || || ||| ||| || ||||| |||| Sbjct 1454 AAGACCATCAAGGCCAATCCGGACTCGCGCCGCATCATCGTCAGCGCCTGGAACGTGGCG 1513 Query 52098 GATTTGGATGATATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTAGCTGAA 52157 || | | |||||| |||| |||||||| | | ||||| ||||| || || || Sbjct 1514 GACATCCCGAAGATGGCGCTGGCGCCCTGCCACGCGTTCTTCCAGTTCTACGTCGCGGAC 1573 Query 52158 GGTAAGCTTTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTT 52217 || ||||| |||||||| |||| ||||| ||||||||| ||| ||||||| ||||| Sbjct 1574 GGCAAGCTGTCGTGCCAGCTGTACCAGCGCAGTGCCGACATCTTCCTGGGCGTGCCGTTC 1633 Query 52218 AACATTGCCAGCTATTCCTTGCTGACGCATCTGATTGCTCGAGCAGT 52264 ||||| |||||||| | | || ||||| |||| || | |||||| Sbjct 1634 AACATCGCCAGCTACGCGCTACTCACGCACATGATCGCGC-AGCAGT 1679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190085049401110