Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031262.1 Length=54751 Score E Sequences producing significant alignments: (Bits) Value seq4176 248 3e-61 >seq4176 Length=744 Score = 248 bits (274), Expect = 3e-61 Identities = 297/398 (75%), Gaps = 18/398 (5%) Strand=Plus/Plus Query 41212 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACCGACGAC 41271 |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 41272 AACGCGCATTTCTGGGCGCAGATGGACTACCTCACGCCGCAGCTGCTGCGCATCCTTGCG 41331 ||| |||||||| ||||||||||| | || |||||| | ||||| || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 41332 CCCGGGCGGATCTACGCCTG---CCATGTCAAGGACCGCATCTTGTTCGGAAACGTCACC 41388 || || ||| | |||||| ||| || |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 41389 GGCGCAGGCGTTCCCACCGTCTCCCCGTTCCACGCCGAGGCGATCTTCCAC---GGCCGC 41445 |||| || || || |||||| |||||||||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 41446 AAACACGGCTTCGACTACCTCGGCATGATCACCGTGGTCACCGATGTGGTGCGGGAAAAC 41505 ||||||||| | | | | |||||||||||||| |||||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 41506 AACCAGACGTACCGGCTGGGCTGGT-CGGAGCAGTGC--AAGGACGCTACGAAGATGGGC 41562 |||||||| ||||| ||| | || | | | ||| ||||||| |||||||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTACAGCGAGATGCTGAAGGACGGCACGAAGATGGGC 353 Query 41563 GTCGGCTCGCCGGAATACATTCTGTTGTTCCACAGGCC 41600 |||| || |||||| | ||| || | | || ||| Sbjct 354 TGCGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCC 391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175071514315006