Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_031266.1 Length=44872 Score E Sequences producing significant alignments: (Bits) Value seq4176 253 6e-63 >seq4176 Length=744 Score = 253 bits (280), Expect = 6e-63 Identities = 301/400 (75%), Gaps = 20/400 (5%) Strand=Plus/Plus Query 39357 CCGTTCTCCAACCACTACGAGTACACGCCGAGCTACAACGATTTCGGCCACACCGACGAC 39416 |||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||| Sbjct 3 CCGTTCAGCAACCACTACGAGTACACGCCGAGCTACAACGACTTCGGCCACACGGACGAT 62 Query 39417 AACGCGCATTTCTGGGCGCAGATGGACTACCTCACACCGCAGCTGCTGCGCATCCTCGCG 39476 ||| |||||||| ||||||||||| | || || ||| | ||||| || || ||| Sbjct 63 GACGGGCATTTCTTCGCGCAGATGGATCATCTGACGCCGAACCTGCTCCGTGCGCTGGCG 122 Query 39477 CCGGGCCGTATCTACGCCTG---CCACGTCAAGGACCGCATCTTGTTCGGCAACGTCACC 39533 |||||||| | |||||| |||||| |||||||| ||| ||||||| || ||| Sbjct 123 CCGGGCCGGCT---CGCCTGCATCCACGTGAAGGACCGGATCCTGTTCGGTGCAGTGACC 179 Query 39534 GGCGCCGGCGTGCCCACCGTGTCCCCGTTTCACGCCGAGGCGATCTTCCAC---GGCCGC 39590 |||| || ||||| ||||| ||||| |||||| || ||| ||| ||| Sbjct 180 GGCGAGGGTGTGCCGACCGTCAATCCGTTCCACGCCAAGTGCATCGAGCACTATATGCGC 239 Query 39591 AAACACGGCTTCGACTACCTCGGCATGATCACCGTCGTAACCGATGTGGTGCGGGAAAAC 39650 ||||||||| | | | | ||||||||||||||||| ||||| || ||||| || ||| Sbjct 240 ---CACGGCTTCCAGTTCATGGGCATGATCACCGTCGTCACCGACGTCGTGCGCGAGAAC 296 Query 39651 AACCAGACGTACCGGCTGGGCTGGTCCGAGC-AG-TGC--AAAGACGCCACCAAGATGGG 39706 |||||||| ||||| ||| | || | ||| || ||| || |||| ||| |||||||| Sbjct 297 AACCAGACCTACCGCCTG---TCGTAC-AGCGAGATGCTGAAGGACGGCACGAAGATGGG 352 Query 39707 CGTCGGCTCCCCGGAATACATTCTGCTGTTCCACAAACCG 39746 | |||| ||| |||||| | |||||| | | ||| ||| Sbjct 353 CTGCGGCAGCCCCGAATACGTGCTGCTGATGCGCAAGCCG 392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143460535390108