Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Byssoonygena_20ceratinophila_20[genbank_20GCA_5F001430925.1_202015- 11-03] 4,851 sequences; 27,454,949 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq3060 111 1e-19 seq4836 104 2e-17 >seq3060 Length=205498 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 44147 TCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAG 44206 |||||||||||||| ||||| | ||| ||| | || || || || || || || || Sbjct 122616 TCCTTTTGGATGTTATAATCAGAGAGAGTGCGACCATCCTCAAGTTGTTTGCCAGCGAAA 122557 Query 44207 ATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT 44266 ||||| || |||||||||| ||| | || ||||| ||| ||||| |||| | Sbjct 122556 ATCAAGCGTTGCTGATCTGGAGGGATGCCCTCCTTATCCTGAATCTTGGTTTTCACGTTA 122497 Query 44267 CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACG 44326 | ||||| |||| |||||| ||||| | || || |||||||||||||| ||||| ||| Sbjct 122496 TCGATGGTATCGGAGGATTCAACCTCGAGAGTGATAGTCTTTCCCGTGAGAGTCTTGACG 122437 Query 44327 A 44327 | Sbjct 122436 A 122436 Score = 89.7 bits (98), Expect = 4e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 ||| || || |||||||| || | || ||| |||| || ||||| || |||||||| Sbjct 122845 CTCTTTCTGAATGTTGTAGTCTGATAGCGTGCGACCGTCCTCGAGCTGTTTGCCGGCAAA 122786 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 |||||||||||||| |||| || | || ||||| || ||||| | || | || Sbjct 122785 AATCAAACGCTGCTGGTCTGGTGGAATTCCCTCCTTGTCTTGAATCTT-AGTTTTGACGT 122727 Query 44266 T-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCA 44324 | | || ||||| | || || || || | ||| || || ||||| || | |||||||| Sbjct 122726 TGTCGATTGTGTCTGAAGACTCTACTTCAAGCGTGATTGTTTTTCCGGTCAAGGTCTTCA 122667 Query 44325 CGAAGATTTGCAT 44337 | || || ||||| Sbjct 122666 CAAAAATCTGCAT 122654 >seq4836 Length=199183 Score = 104 bits (114), Expect = 2e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207 |||||||||| ||||||||| | || |||| || |||||||| || || || | Sbjct 162949 CCTTTTGGATATTGTAATCGCTCAAAGTACGGCCGTCCTCGAGCTGCTTTCCAGCGAAAA 162890 Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC 44267 ||||||||||||| || | ||| | |||||||| ||| || || ||||| | Sbjct 162889 TCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCCTGGATTTTGCTCTTCACATTGT 162830 Query 44268 CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGA 44327 | || |||||| ||| ||||| || | || || ||||| || ||||||||||| |||| Sbjct 162829 CGATCGTGTCGCTGGACTCCACTTCAAGGGTGATAGTCTTGCCGGTGAGGGTCTTGACGA 162770 Query 44328 AG 44329 || Sbjct 162769 AG 162768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359969116805067