Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq481 91.5 2e-13
>seq481
Length=22500
Score = 91.5 bits (100), Expect = 2e-13
Identities = 115/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || ||||||||||| || ||| | |||||||| ||||||||||| || ||
Sbjct 2480 ATGTATGTATCGATGAGGAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 2539
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|||||||| |||||||| || || | || || ||||| || ||| || || | ||
Sbjct 2540 AATCCGTAGAAGCATCGTGCCTCTGGGATCTGGACTTCACCGCTGAAGCGCTCGACAAGG 2599
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391
|| ||||| ||||| |||||| || ||||| || ||
Sbjct 2600 TTCTCGTTGACGATTCCGTCGGATGCAGCGAAGAATGC 2637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517523791922280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |