Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq481 91.5 2e-13 >seq481 Length=22500 Score = 91.5 bits (100), Expect = 2e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| || ||| | |||||||| ||||||||||| || || Sbjct 2480 ATGTATGTATCGATGAGGAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATTTGG 2539 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 |||||||| |||||||| || || | || || ||||| || ||| || || | || Sbjct 2540 AATCCGTAGAAGCATCGTGCCTCTGGGATCTGGACTTCACCGCTGAAGCGCTCGACAAGG 2599 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 || ||||| ||||| |||||| || ||||| || || Sbjct 2600 TTCTCGTTGACGATTCCGTCGGATGCAGCGAAGAATGC 2637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517523791922280