Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq1217 82.4 6e-11
>seq1217
Length=16346
Score = 82.4 bits (90), Expect = 6e-11
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 20225 TGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAACA 20284
|||| || || || || || || ||| |||||||||| || |||||||| ||| | | |
Sbjct 12873 TGGGACCAGTCTACGGCTTCCAGTGGCGACATTTTGGTGCCGAATATGTCGACGCGCAGA 12932
Query 20285 CAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAACGA 20344
| | ||| ||| | || || || || || | | |||||| | | || | |
Sbjct 12933 CGGACTATACGGGAAAGGGTGTTGACCAGTTGGCAGAGGTTATTCACAAGCTGAAGAACA 12992
Query 20345 ACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAATGG 20404
| || | || | ||||| ||| | |||| |||||| | |||||| || ||||||
Sbjct 12993 ATCCCTATGATCGCAGAATCATTCTCAGCGCATGGAACCCCAAAGATATGAAACTAATGG 13052
Query 20405 CTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTT 20442
||||||| || || |||||| | ||| ||||| ||||||
Sbjct 13053 CTTTGCCACCTTGCCATATG-TTTGCGCAATTCTACGTT 13090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399167599899595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |