Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq332 84.2 2e-11
>seq332
Length=18159
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| | ||| | |||| || ||||| || || |||||||| |||
Sbjct 2244 CCACCACGGAGACGGAGAACGAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAG 2303
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||| || || || || || || | |||| ||||||||| || |||||
Sbjct 2304 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGA 2363
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTCCAC 139716
||||| || ||||| ||| | || | ||| | | || | || ||| ||| ||| ||
Sbjct 2364 ATGCCCTCCTTGTCC-TGAATCTTGGACTTAACATTGTCGATGGTATCGCTGGACTCAAC 2422
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGA 139754
||||| ||| | ||||||||||| | || || ||||
Sbjct 2423 CTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGA 2460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496043097103200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |