Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq332 105 7e-18
>seq332
Length=18159
Score = 105 bits (116), Expect = 7e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 142955 TGGCCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCG 143014
|| || || || | ||| | || || || | ||||| || ||||| ||||||||||||
Sbjct 1785 TGACCACCACGGAGACGAAGGACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAATCG 1844
Query 143015 CTCATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 143074
|||| || | || || || || ||||||||| ||||||| || ||||| || ||
Sbjct 1845 CTCAACGTACGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGTCGCTGCTGGTCAGGT 1904
Query 143075 GGTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCT 143134
|| || || || || || ||| ||| || | | || | |||||||| || ||
Sbjct 1905 GGGATTCCCTCCTTATCCTGAATCTTTGACTTGACGTTGTCAATCGTGTCCGAGGACTCG 1964
Query 143135 ACTTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
||||| | || | |||||||| ||||| || || || || |||||||||
Sbjct 1965 ACTTCCAATGTAATAGTCTTGCCCGTCAAAGTCTTAACAAAGATTTGCATA 2015
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 506993035680720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |