Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_004690.1
Length=113220
Score E
Sequences producing significant alignments: (Bits) Value
seq332 96.9 3e-15
>seq332
Length=18159
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213
||| | |||||||||||| || || || ||||| || ||| || | | |||| ||
Sbjct 2261 AACGAGATGAAGGGTGGACTCCTTCTGGATGTTATAGTCGGAGAGGGTGCGGCCGTCCTC 2320
Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273
| ||| ||||| ||| | ||||||||||| ||||| ||||| || || |||||
Sbjct 2321 AAGTTGCTTGCCGGCGAAAATCAAACGTTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTG 2380
Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333
||| ||| ||| ||| | || ||||||||||| || || || | ||| ||||| ||
Sbjct 2381 AATCTTGGACTTAACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTT 2440
Query 15334 ACCTGTCAGAGTTTTTAC 15351
|| || || || || ||
Sbjct 2441 GCCGGTGAGGGTCTTGAC 2458
Score = 84.2 bits (92), Expect = 2e-11
Identities = 127/181 (70%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220
||||| ||||| || || || |||||||| || ||| | | |||| || | ||
Sbjct 2551 TGAAGAGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGAGTGCGACCGTCCTCGAGCTGC 2610
Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280
||||||||| | |||| ||||||||||| ||||| || || ||||| ||| |||
Sbjct 2611 TTGCCAGCGAAGATCAGGCGTTGTTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTG 2670
Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340
||| ||| | || ||||| ||||| || || || | ||| ||||| || || |||
Sbjct 2671 GACTTGACATTATCGATGGTGTCGCTGGACTCGACTTCAAGGGTGATGGTCTTGCCAGTC 2730
Query 15341 A 15341
|
Sbjct 2731 A 2731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 362164320207111
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |