Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq358 87.8 2e-12 >seq358 Length=50161 Score = 87.8 bits (96), Expect = 2e-12 Identities = 108/148 (73%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 19344 GATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCA 19403 || || | || || ||| | || ||||||||||||||||| | | || || || | Sbjct 15160 GAACTACCAAGATTCCTCAGATCGGTGATAAGTTTGCTTCCCGTCACGGACAGAAGGGTA 15219 Query 19404 CATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGG 19463 || |||||| | || || ||||| |||||||| || |||| | | ||||| ||||| | Sbjct 15220 CAATTGGTATTACCTACCGACAAGAGGATATGCCCTTCACTAGACAAGGTATCGTGCCAG 15279 Query 19464 ATCTTATTATTAACCCACATGCTTTTCC 19491 || | ||||| |||||||| || |||| Sbjct 15280 ATTTGATTATCAACCCACACGCCATTCC 15307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595846891443600