Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq358 87.8 2e-12
>seq358
Length=50161
Score = 87.8 bits (96), Expect = 2e-12
Identities = 108/148 (73%), Gaps = 0/148 (0%)
Strand=Plus/Plus
Query 19344 GATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCA 19403
|| || | || || ||| | || ||||||||||||||||| | | || || || |
Sbjct 15160 GAACTACCAAGATTCCTCAGATCGGTGATAAGTTTGCTTCCCGTCACGGACAGAAGGGTA 15219
Query 19404 CATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGG 19463
|| |||||| | || || ||||| |||||||| || |||| | | ||||| ||||| |
Sbjct 15220 CAATTGGTATTACCTACCGACAAGAGGATATGCCCTTCACTAGACAAGGTATCGTGCCAG 15279
Query 19464 ATCTTATTATTAACCCACATGCTTTTCC 19491
|| | ||||| |||||||| || ||||
Sbjct 15280 ATTTGATTATCAACCCACACGCCATTCC 15307
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595846891443600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |