Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq332 111 1e-19
>seq332
Length=18159
Score = 111 bits (122), Expect = 1e-19
Identities = 154/213 (72%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||||||||| || || | || ||| | ||||| ||||| ||
Sbjct 2014 ATGCAAATCTTTGTTAAGACTTTGACGGGCAAGACTATTACATTGGAAGTCGAGTCCTCG 1955
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| || || | ||| |||| | ||| || || || || || |||||||||||
Sbjct 1954 GACACGATTGACAACGTCAAGTCAAAGATTCAG-GATAAGGAGGGAATCCCACCTGACCA 1896
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||| || || || | || |||| || || || ||||||||||
Sbjct 1895 GCAGCGACTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGTTGAGCGATTACAA 1836
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
|| ||||| || || || || || || || ||
Sbjct 1835 CATCCAAAAGGAGTCTACTCTCCACTTGGTCCT 1803
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433310197125365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |