Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq481 129 7e-25
>seq481
Length=22500
Score = 129 bits (142), Expect = 7e-25
Identities = 159/216 (74%), Gaps = 6/216 (3%)
Strand=Plus/Plus
Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117
||| |||||||| |||||||||||||| ||||| ||||| || || | ||| |||||
Sbjct 2168 GTGAAGACCCTCATCACGGGAGATGAGCTCATTGGAGAAAGTAAGCCCGGCCATCAGACC 2227
Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177
|||||||||||||| || || | |||||||| ||||||||||| ||||| |||
Sbjct 2228 ACGCTTCTTCAACCAAAAGATGGACGCGAATGAACCGGAGAAGAAGATACCCTCAACAGC 2287
Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCAT 126234
||||| |||| ||||| | |||||||| ||||| |||| || ||| | |
Sbjct 2288 TGCGAATGCAACAAGACGTTGAGCAAAGG---TAGACTTCTTGTCTTGAATCCATCTGAC 2344
Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGACGGT 126270
||||| | ||||| |||| ||| || || || ||
Sbjct 2345 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTGT 2380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597328429012680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |