Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq481 116 5e-21 >seq481 Length=22500 Score = 116 bits (128), Expect = 5e-21 Identities = 115/149 (77%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||| |||||||| |||||||||||||| ||||| ||||| || || | ||| ||||| Sbjct 2168 GTGAAGACCCTCATCACGGGAGATGAGCTCATTGGAGAAAGTAAGCCCGGCCATCAGACC 2227 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||||||||| || || | ||||| || ||||||||||| ||||| ||| Sbjct 2228 ACGCTTCTTCAACCAAAAGATGGACGCGAATGAACCGGAGAAGAAGATACCCTCAACAGC 2287 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG 127679 ||||| |||| ||||| | ||||||| Sbjct 2288 TGCGAATGCAACAAGACGTTGAGCAAAGG 2316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613481348340360