Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq481 116 5e-21
>seq481
Length=22500
Score = 116 bits (128), Expect = 5e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Plus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||| |||||||| |||||||||||||| ||||| ||||| || || | ||| |||||
Sbjct 2168 GTGAAGACCCTCATCACGGGAGATGAGCTCATTGGAGAAAGTAAGCCCGGCCATCAGACC 2227
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||||||||| || || | ||||| || ||||||||||| ||||| |||
Sbjct 2228 ACGCTTCTTCAACCAAAAGATGGACGCGAATGAACCGGAGAAGAAGATACCCTCAACAGC 2287
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGG 127679
||||| |||| ||||| | |||||||
Sbjct 2288 TGCGAATGCAACAAGACGTTGAGCAAAGG 2316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613481348340360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |