Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq332 111 6e-19
>seq332
Length=18159
Score = 111 bits (122), Expect = 6e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || ||||| |||||||| ||||| || ||
Sbjct 2242 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTTGAAGTTGAGTCCTCA 2183
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || |||| || |||||||||||||| || ||||| || |||||
Sbjct 2182 GATACCATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATTCCCCCGGATCAG 2123
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|| ||| | ||||| | || || |||||||| ||||| | || ||| | || || ||
Sbjct 2122 CAGCGTCTCATTTTTGCGGGAAAGCAACTTGAGGATGGCCGTACCTTGTCCGACTACAAC 2063
Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258
|| | ||||| | || || ||||| ||
Sbjct 2062 ATCCAAAAGGAGTCTACTCTCCACTTGGT 2034
Score = 91.5 bits (100), Expect = 6e-13
Identities = 136/193 (70%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
|||| || || || || || || || || || ||||| ||||| || |||| ||| |
Sbjct 2460 TCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCG 2401
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| | |||| || ||||| || ||||| || ||||||||||| || |||||||| |
Sbjct 2400 ACAATGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAACGTTTGA 2341
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
||||| | || || |||||||| || || | || | | || ||||| || | ||||
Sbjct 2340 TTTTCGCCGGCAAGCAACTTGAGGACGGCCGCACCCTCTCCGACTATAACATCCAGAAGG 2281
Query 391240 ATGCAACACTTCA 391252
| | || |||||
Sbjct 2280 AGTCCACCCTTCA 2268
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975633066870068
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |