Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq1697 105 8e-18
>seq1697
Length=38374
Score = 105 bits (116), Expect = 8e-18
Identities = 129/176 (73%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 159604 TGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCA 159663
||||| | || |||||| | || || || || || | ||||| || || | ||||||
Sbjct 31426 TGTAACCTCGTCCATGAGCACGGAGGCCAAGTCTACATGGATGGCGCCAACATGAATGCA 31485
Query 159664 CAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACAT 159723
|| | || || ||| | || |||||| ||||| || ||||| || || ||
Sbjct 31486 CAAATCGGACTGTGCTCACCCGGAGAGATTGGTGCTGATGTCTGCCATCTCAATTTGCAC 31545
Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779
|||||||||||||| || ||||| |||||||| |||||||| || |||||||||||
Sbjct 31546 AAGACATTCTGTATCCCTCATGGTGGTGGAGGACCTGGCGTGGGCCCTATTGGTGT 31601
Score = 89.7 bits (98), Expect = 6e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 158443 CAAAGGTTTGGTATTCCTATGGGATACGGAGGTCCTCATGCTGCATTCTTTGCAACAACA 158502
||||| |||||| | || | || || || ||||||||||| || ||||| || ||
Sbjct 30220 CAAAGATTTGGTGTGCCGTTTGGGTATGGTGGTCCTCATGCAGCTTTCTTCGCTGTAAGC 30279
Query 158503 GACAAGTATAAGAGAAAGATACCTGGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGT 158562
|||||| | ||| ||||||| || || || || | || |||| ||||| |||
Sbjct 30280 GACAAGCACAAGCGAAAGATTCCCGGACGACTTATTGGAGTGTCAAAGGATAGACTGGGT 30339
Query 158563 AATAAAGCATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCA 158622
| | ||| ||| | || |||||||| |||| ||||| || || |||| || ||
Sbjct 30340 GACAGGGCAATGAGACTGGCTCTACAGACACGAGAACAGCACATTCGACGAGAGAAGGCT 30399
Query 158623 ACCAGTAACATCTGCACAGCACAAGCACTGCTGGCTAATATG 158664
|| ||||| | ||||| || || ||| | |||| || |||
Sbjct 30400 ACGAGTAATGTTTGCACTGCGCAGGCATTATTGGCGAACATG 30441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588026420992560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |