Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq332 82.4 5e-11 >seq332 Length=18159 Score = 82.4 bits (90), Expect = 5e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | || || || || ||||| ||||| || | | | || |||| || Sbjct 2034 ACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCA 2093 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 || || ||||| ||||| || || || ||||| || | || | |||||||| || | Sbjct 2094 AGTTGCTTTCCCGCAAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGA 2153 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||| || ||| | || | || || |||||| || | || || || || Sbjct 2154 ATCTTCGACTTAACGTTGTCGATGGTATCTGAGGACTCAACTTCAAGAGTGATAGTCTTG 2213 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 2214 CCGGTGAGGGTCTTGACGAAGATCTGCATA 2243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324620262732888