Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq1217 87.8 1e-12
>seq1217
Length=16346
Score = 87.8 bits (96), Expect = 1e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 29799 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 29858
||||| || ||||| |||||||| |||||||| ||||| |||| ||| || | |||
Sbjct 13309 CTTCAACGCATCCACATGATCCAGATAGACGTGTGCGTCACCCATGGTATGTATAAAGGT 13250
Query 29859 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 29918
|| || | | || || ||||| | ||| | ||| ||||||| || ||||||||
Sbjct 13249 GCCTGGGACCAAATCGCACACATGAGCAAGCATATGCGTCAGGAGAGCATAACTGGCGAT 13190
Query 29919 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 29969
|| || || || || || ||||| || | || |||||||||||| ||
Sbjct 13189 ATTGAATGGGACACCAAGGCCCATATCGCAACTCCGCTGGTAGAGCTGGCA 13139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408600812328983
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |