Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq332 120 2e-22
>seq332
Length=18159
Score = 120 bits (132), Expect = 2e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| || || || ||||| || ||||| || ||||| |||| | || | | |||| ||
Sbjct 2034 ACCAAGTGGAGAGTAGACTCCTTTTGGATGTTGTAGTCGGACAAGGTACGGCCATCCTCA 2093
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
| |||||| || ||||| || | |||||| ||||| || |||||||| || |||||||||
Sbjct 2094 AGTTGCTTTCCCGCAAAAATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCTTGA 2153
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
|| || || || | || | || || || | || ||||||||||||| || |||
Sbjct 2154 ATCTTCGACTTAACGTTGTCGATGGTATCTGAGGACTCAACTTCAAGAGTGATAGTCTTG 2213
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| | || || || || ||||||||
Sbjct 2214 CCGGTGAGGGTCTTGACGAAGATCTGCAT 2242
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396262119273447
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |