Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2981 614 7e-171
seq3177 237 2e-57
seq332 199 5e-46
seq3343 123 3e-23
seq2643 105 9e-18
seq1553 89.7 7e-13
>seq2981
Length=90661
Score = 614 bits (680), Expect = 7e-171
Identities = 1094/1587 (69%), Gaps = 22/1587 (1%)
Strand=Plus/Plus
Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361
|| || || ||| | |||||||| ||||| ||||| ||| | | | |||| || |
Sbjct 25968 ATCGGAATTGATCTTGGAACTACCTACTCCTGTGTGGGTATCTTCCGCGATGACCGAATC 26027
Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421
|| || || | || || ||||| ||||| || || || || | ||| ||||| || |||
Sbjct 26028 GAAATCATTGCCAACGATCAAGGCAACCGCACCACCCCCTCCTTCGTCGCCTTCACGGAT 26087
Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481
| ||| ||||| | |||||||| || |||||||| |||||||||||| || |||
Sbjct 26088 ACTGAGCGTCTGATCGGAGATGCTGCGAAAAATCAAGTCGCTATGAACCCTGCGAACACT 26147
Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541
||||| || || ||||||||||| ||||||||||| | || | || || | |||
Sbjct 26148 GTCTTCGATGCTAAGCGTCTTATCGGTCGCAAGTTCGCAGACCCTGAGGTTCAGGCTGAT 26207
Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601
|| ||| ||| | | | ||| || | || | | || ||||| | || | |||
Sbjct 26208 ATGAAGCACTTCCCAT-TCAAG--GTCCTCGATCGCGGTGGAAAGCCAGTCGTTGAGGTT 26264
Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661
|| || | || |||||||| ||||| |||| || || || || || ||| | ||| |
Sbjct 26265 GAGTTCAAGGGCGAGAAGAAGCAATTCACTCCTGAGGAGATCTCATCGATGATCTTGGTC 26324
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||| |||||||| || | | | | ||| ||| || || | || || || |||
Sbjct 26325 AAGATGAGAGAGACTGCTGAGGCCTACCTTGGTGGAACCGTCAACAACGCTGTCGTTACT 26384
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG--CTGCTATTG 195779
|| ||||| ||||||| ||| |||||||| || || || |||||||||| ||| ||||
Sbjct 26385 GTCCCTGCCTACTTCACTGACTCACAACGTCAAGCCACCAAGGACGCTGGCCTG--ATTG 26442
Query 195780 CGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839
| || || ||| ||| |||| |||||||| || || || || || ||||| || |||
Sbjct 26443 CTGGCCTCAACGTTCTCCGAATCATCAATGAGCCTACCGCAGCCGCCATTGCCTACGGTT 26502
Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899
|||||||||| || | || || || | ||||| ||||| ||||| || || |
Sbjct 26503 TGGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGAGGAACCT 26562
Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
| |||||||| ||| | | ||||| | ||||| ||||| || ||| ||||||||||||
Sbjct 26563 TCGATGTCTCTCTTTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCTGGTG 26622
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAG 196018
||||||| | |||||||| || ||||| ||||| || || || ||| | |||
Sbjct 26623 ATACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC-AACGAG 26681
Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078
||| || ||| | ||||||||| | ||| || || | ||||| ||||| || |
Sbjct 26682 TTCAAGCGCAAGCACAAGAAAGATTTATCTTCCAACGCTCGTGCTCTCCGTCGTCTCCGC 26741
Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138
||||| || || |||||||| ||||| ||||| || | || ||||| |||| ||
Sbjct 26742 ACTGCTTGCGAGCGTGCCAAGCGAACCCTCTCCTCATCCGCCCAAACCTCCATTGAAATC 26801
Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198
|| || | || || || ||||| ||||| || | || |||||||| || || || |||
Sbjct 26802 GACTCTCTCTTCGAGGGTATTGATTTCTACACCTCCATCACCCGTGCTCGGTTCGAGGAG 26861
Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCA 196258
| | || | || | | || || || | || ||| ||||||
Sbjct 26862 CTTTGCCAGGACCTCTTCCGATCAACCACCACCCCAGTCGACCGTGTCCTTGCTGACGCC 26921
Query 196259 AAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCG 196318
||||| |||||||| ||||| | || || || || || ||||| || |||||||||||
Sbjct 26922 AAGATTGATAAGTCAAAGGTCCACGAGATCGTTCTCGTTGGAGGTTCCACCCGTATTCCC 26981
Query 196319 AAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAAC 196378
|||||| || | | | || |||||| || || ||||| | ||||||
Sbjct 26982 CGTATTCAAAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCAATCAAC 27041
Query 196379 CCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC 196438
|| ||||| || || || || ||||| ||||| |||||||| |||||||| || ||||
Sbjct 27042 CCCGATGAGGCCGTCGCCTACGGTGCCGCCGTCCAGGCTGCCATTCTCTC---TGGTGAC 27098
Query 196439 A------ATAA--TAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490
| ||| ||| | |||||| || | || ||||| || || | ||| | |
Sbjct 27099 ACCTCATCTAAGTCAACCAACGAGATCT--TGTTGCTCGATGTGGCGCCATTGTCCATCG 27156
Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550
|| | || || || ||||| ||||| || | ||| | ||||| |||||||| |
Sbjct 27157 GTATCGAGACTGCTGGTGGCCAGATGACCAAGCTCATTCCCCGCAACACCACTATTCCCA 27216
Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610
| |||||| | | || || || || | |||||||| ||||| ||||| | || ||||
Sbjct 27217 CCAAGAAGTCAGAGGTTTTCTCTACCTTCTCCGATAACCAACCTGGTGTCCTCATCCAAG 27276
Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670
| | || || ||||| || | ||||| ||| | || | || | ||||| | |
Sbjct 27277 TCTTCGAGGGTGAACGTCAACGCACCAAGGACAACAACCTGTTGGGCAAGTTCGAGCTCA 27336
Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730
| || || ||| |||| ||| | |||||||| || || | || ||||||| | || |
Sbjct 27337 CTGGTATCCCACCTGCGCCCCGTGGTGTTCCTCAAATCGAGGTCACCTTCGATGTCGATG 27396
Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790
| || || || |||||||| | ||| || |||| | ||||||| ||| | || ||||
Sbjct 27397 CCAACGGTATCATAAACGTCTCTGCTCTCGAGAAGGGTACTGGCAAGTCTAACAAAATTG 27456
Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850
| |||||||| |||||||| || || || |||||||| || || |||||| | || |
Sbjct 27457 TCATTACCAACGACAAGGGCCGTCTGTCCAAGGAGGACATCGAGCGTATGTTGGCCGAGG 27516
Query 196851 CGGAAAAGTACAGGGAAGAAGACGAGG 196877
| || ||||||| || || || ||||
Sbjct 27517 CTGAGAAGTACAAGGCTGAGGATGAGG 27543
>seq3177
Length=131459
Score = 237 bits (262), Expect = 2e-57
Identities = 503/740 (68%), Gaps = 33/740 (4%)
Strand=Plus/Minus
Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769
|| ||| | ||||| || || ||||||| || || || || || || ||||| ||
Sbjct 115994 GCCGTTATCACTGTTCCCGCATACTTCAACGACAACCAGCGTCAAGCTACCAAGGATGCC 115935
Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829
| ||| || || ||||| ||| |||| | || ||||| || || || || ||||| ||
Sbjct 115934 GGTGCCATCGCTGGTCTCAACGTTCTTCGTATCATCAACGAGCCTACTGCCGCTGCTATC 115875
Query 195830 GCTTATGGTCT-------GGACAAG---AACAAGGA-CGAAGATAAAAATGTATTGATCT 195878
|| || ||||| ||| ||| |||||||| |||| |||| ||||| |
Sbjct 115874 GCCTACGGTCTCGGTGCTGGA-AAGTCCAACAAGGAGCGAA-------ATGTTTTGATTT 115823
Query 195879 TTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCG 195938
||||||||||||||| || || |||||||| || ||||| ||| | || ||| | |||
Sbjct 115822 ATGATCTCGGTGGTGGAACTTTCGATGTCTCCCTCCTCAACATTCAGGGAGGTGTTTTCA 115763
Query 195939 AAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTT- 195997
|| |||||||||||||||||||| || | || || | ||||||||| | | |||
Sbjct 115762 CTGTCAAGGCTACTGCTGGTGATACCCACTTGGGAGGACAGGATTTCGATAC-CAACTTG 115704
Query 195998 CTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCT 196057
|| || || | ||||||| || |||| ||||| ||||| || | ||
Sbjct 115703 CTTGAGCACTTCAAGAAGGAGTTCCAGCGCAAGACCAAGAAGGATATGTCCAACGACCCC 115644
Query 196058 AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG 196117
| || ||| | || || | || || || || ||||| || |||||||| || | |||
Sbjct 115643 CGTGCCCTTAGACGTCTCCGTACCGCTTGCGAGCGTGCTAAGCGAACTCTTTC--CAACG 115586
Query 196118 --GCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTA 196175
||||| || | ||||| |||||||| ||||||| ||| || ||| | | |
Sbjct 115585 GTGCTCAGACCACTGTTGAAATTGATTCCCTGTTTGATGGAGAGGATTTCAACGCCCAAA 115526
Query 196176 TTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACC 196233
| |||||||| ||||| || || | || || | || | || | | |||| ||
Sbjct 115525 TCACCCGTGCTCGTTTCGAGGATCTGAATTCCAAGGCTTTCAATGGTA--CTTTGGATCC 115468
Query 196234 TGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293
|||| ||||| | || || || | |||||| |||||| ||||| || || ||
Sbjct 115467 GGTTGCCCAAGTCTTGAAGGATGCGAACCTCGATAAGAGTAAGGTCGATGAGATCGTTCT 115408
Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAA--T 196351
||| || ||||| ||||||||||| ||| ||| || | || | ||||| |
Sbjct 115407 TGTTGGTGGATCTACCCGTATTCCCCGGATACAAAAGCTCCTGAGTGATTTCTTTGACGG 115348
Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411
|| ||| || | || | |||||||| ||||| || ||||| || ||||| || |||
Sbjct 115347 AAAGAAGCTT--GAGAAGAGCATCAACCCCGATGAGGCTGTTGCGTACGGTGCTGCTGTT 115290
Query 196412 CAGGCTGCTATTCTCTCAGG 196431
||||||| ||| ||||| ||
Sbjct 115289 CAGGCTGGTATCCTCTCCGG 115270
>seq332
Length=18159
Score = 199 bits (220), Expect = 5e-46
Identities = 184/233 (79%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || ||||| || || || |||||||| || || |||||||
Sbjct 2247 GTGGTATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTTGAAGTTGAGT 2188
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| ||||| || ||||| ||| | || | ||||||||||||||||| |||||||| || |
Sbjct 2187 CCTCAGATACCATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 2128
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| || || |||||||| || || || ||||| ||||| |||||| | | || |
Sbjct 2127 ATCAGCAGCGTCTCATTTTTGCGGGAAAGCAACTTGAGGATGGCCGTACCTTGTCCGACT 2068
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | ||||||||||||||||| ||| | || || | || || ||||||
Sbjct 2067 ACAACATCCAAAAGGAGTCTACTCTCCACTTGGTCCTTCGTCTCCGCGGTGGT 2015
Score = 178 bits (196), Expect = 2e-39
Identities = 179/233 (77%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| |||||||||||||||| || || | || || || ||||| || | || || ||||
Sbjct 2019 GTGGTATGCAAATCTTTGTTAAGACTTTGACGGGCAAGACTATTACATTGGAAGTCGAGT 1960
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| || || ||| |||| | |||||||| |||||||| || || ||||| |
Sbjct 1959 CCTCGGACACGATTGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGAATCCCACCTG 1900
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| ||||| || ||||||||||| ||||| || ||||| ||||| | ||||
Sbjct 1899 ACCAGCAGCGACTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGTTGAGCGATT 1840
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| | ||||||||||||||||| ||| | || || | || || ||||||
Sbjct 1839 ACAACATCCAAAAGGAGTCTACTCTCCACTTGGTCCTTCGTCTCCGTGGTGGT 1787
Score = 161 bits (178), Expect = 1e-34
Identities = 158/204 (77%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945
||||| || || |||||||| || || ||||| ||||| |||||||| |||| ||
Sbjct 2729 ACTGGCAAGACCATCACCCTTGAAGTCGAGTCCAGCGACACCATCGATAATGTCAAGTCC 2670
Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005
|||||||| || ||||| || ||||| || || || ||||| || || || ||||| ||
Sbjct 2669 AAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAACGCCTGATCTTCGCTGGCAAG 2610
Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065
||||| || || || || || ||| |||| |||||| |||| |||||||| ||||| |||
Sbjct 2609 CAGCTCGAGGACGGTCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACTCTTCAC 2550
Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089
|||||||| | ||||| || |||
Sbjct 2549 CTTGTTCTCCGTCTTCGTGGCGGT 2526
Score = 141 bits (156), Expect = 1e-28
Identities = 161/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933
|| || ||||| || || || || |||||||| ||||||||||| || || |||||
Sbjct 2458 GTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGAC 2399
Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993
|| | || |||||||||| || ||||| |||||||| || || |||||||| | |||
Sbjct 2398 AATGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAACGTTTGATT 2339
Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053
|| || || || || ||||| || || || |||||| | || || ||| | || ||||||
Sbjct 2338 TTCGCCGGCAAGCAACTTGAGGACGGCCGCACCCTCTCCGACTATAACATCCAGAAGGAG 2279
Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| || || || || ||||| | || || ||||||
Sbjct 2278 TCCACCCTTCATCTCGTTCTCCGTCTCCGTGGTGGT 2243
>seq3343
Length=27574
Score = 123 bits (136), Expect = 3e-23
Identities = 227/328 (69%), Gaps = 10/328 (3%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||||||||| || || | | | || | || || |||| ||||| |||
Sbjct 18140 AAGATGAAGGAGACTGCTGAGTCCTACCTCACCAAGCCCGTCCAAAATGCTGTTGTCACT 18081
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
|| || || ||||||| || || ||||| || || || |||||||||| | || ||
Sbjct 18080 GTCCCAGCCTACTTCAACGACTCGCAACGTCAAGCTACCAAGGACGCTGGTCAAATCGCT 18021
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
||||| ||| ||| | | |||| || || || || ||||| | || ||||| ||
Sbjct 18020 GGTCTTAACGTTCTCCGTGTGGTCAACGAGCCTACCGCTGCTGCTCTCGCATATGGCCTT 17961
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
|| ||| | ||||| ||||| | || | ||| ||| | || || || || ||
Sbjct 17960 GAGAAGGATGAGGAC-AAGAT--CATTGCA---GTCTACGATTTGGGAGGAGGAACCTTC 17907
Query 195902 GATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959
||| |||| ||||| | || |||| ||| | ||||| || ||| |||| ||||
Sbjct 17906 GATATCTCCATTCTCGAGATCCAGAAG--GGTGTTTTCGAGGTTAAGTCTACCAACGGTG 17849
Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987
|||| || | |||||||| ||||||||
Sbjct 17848 ATACCCACTTGGGTGGTGAGGATTTCGA 17821
>seq2643
Length=14262
Score = 105 bits (116), Expect = 9e-18
Identities = 221/327 (68%), Gaps = 3/327 (1%)
Strand=Plus/Minus
Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721
||||||||||| || ||||||| | || || | || | | || || || |||
Sbjct 2119 AAGATGAAGGAAGTCGCAGAATCTTATCTCGGAAACAAGGTCACCCACGCCGTCGTTACT 2060
Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781
||||| || ||||||| || || |||| || |||||||| || | | || ||
Sbjct 2059 GTACCCGCATACTTCAACGACAACCAGAGACAAGCTACAAAGGATGCCGGTATCATCGCC 2000
Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841
|| | ||| ||| | ||| |||| ||||| || || || || ||||| || |||||
Sbjct 1999 GGCTTGAACGTCCTTCGTATTGTCAACGAACCCACCGCCGCAGCTATTGCGTACGGTCTC 1940
Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901
||||||| | | || | ||| |||| ||| ||||||||||| || || ||
Sbjct 1939 GACAAGACTGATGGAGAGCGTCAAA--TCATTG-TCTACGATCTCGGTGGAGGAACCTTC 1883
Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961
||||| || || ||| ||| || ||||| | ||||| || | || || |||||
Sbjct 1882 GATGTTTCCCTCCTCTCTATCGACCGTGGTGTTTTCGAGGTTCTTTCCACCGCCGGTGAC 1823
Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988
|| || | || ||||| |||||||||
Sbjct 1822 ACCCACTTGGGAGGTGAGGATTTCGAT 1796
>seq1553
Length=189915
Score = 89.7 bits (98), Expect = 7e-13
Identities = 329/503 (65%), Gaps = 28/503 (6%)
Strand=Plus/Minus
Query 198456 GATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAA 198515
||||| | ||||| ||| ||| |||| || | |||| |||| | ||||| |||
Sbjct 21309 GATGTGGCTGGTATGGACGAAGCCAAGGCGGAAATTATGGAGTTTGTCCAATTTCTGAAA 21250
Query 198516 AACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGT 198575
| ||||| |||| | | | |||||| || || || || ||| | || | |||
Sbjct 21249 ACTCCCGAGAAGTTCCAGCGGTTAGGTGCCAAGATTCCCCGAGGAGCTATCCTTTCTGGT 21190
Query 198576 GCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCC 198635
| || ||||| ||||| || || |||| || | || || || ||| || ||
Sbjct 21189 CCACCAGGTACAGGTAAGACTCTCTTAGCAAAGGCAACTGCTGGCGAGTCGCAAGTACC- 21131
Query 198636 TTTCTTCAGTGCTCCGCGG---CGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAG 198692
||||||||||| || | || |||||| | | ||||||||||||||||| |||||
Sbjct 21130 TTTCTTCAGTG-TCAGTGGTTCCGAGTT-CGTGGAGATGTTCGTTGGTGTCGGTGCATCA 21073
Query 198693 CGCGTCCGGGAACTCTTTGAGCAAGCACG-TGAAAATCA-ACCATGTATCATCTTCATTG 198750
| || || || ||||| || | || ||| | || |||||||| || ||||| |
Sbjct 21072 AGAGTGCGAGA--TCTTTTCGCCATGGCGAGGAAGAGCACGCCATGTATAATTTTCATCG 21015
Query 198751 ATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAA-------CTACTACA--CCTGGTA 198801
|||| || |||||| | || | |||| | |||||| | ||| || || |
Sbjct 21014 ATGAAATCGACGCTATCGGCA--AAGC-TCGTGGAAAGAACACCAACTTCAGTGGAGGAA 20958
Query 198802 ATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACA--- 198858
||||||||| || || | || ||| | | || || ||||||||||| |||
Sbjct 20957 CTGATGAGCGAGAAGCCACTCTCAATCAGATCTTGACAGAAATGGATGGTTTCAACACGC 20898
Query 198859 ATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCAC 198918
| ||| | | || ||| |||||| ||| || || || | || ||| | ||
Sbjct 20897 AGGAGCAAG---TTGTCGTGCTTGCTGGTACTAACAGACCAGACGTGCTCGATAAGGCGT 20841
Query 198919 TGCTTCGTCCCGGTCGATTCGAC 198941
|| | ||||| ||||| ||||||
Sbjct 20840 TGATGCGTCCAGGTCGTTTCGAC 20818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657834679323120
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