Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq2981 614 7e-171 seq3177 237 2e-57 seq332 199 5e-46 seq3343 123 3e-23 seq2643 105 9e-18 seq1553 89.7 7e-13 >seq2981 Length=90661 Score = 614 bits (680), Expect = 7e-171 Identities = 1094/1587 (69%), Gaps = 22/1587 (1%) Strand=Plus/Plus Query 195302 ATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGTA 195361 || || || ||| | |||||||| ||||| ||||| ||| | | | |||| || | Sbjct 25968 ATCGGAATTGATCTTGGAACTACCTACTCCTGTGTGGGTATCTTCCGCGATGACCGAATC 26027 Query 195362 GAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGAT 195421 || || || | || || ||||| ||||| || || || || | ||| ||||| || ||| Sbjct 26028 GAAATCATTGCCAACGATCAAGGCAACCGCACCACCCCCTCCTTCGTCGCCTTCACGGAT 26087 Query 195422 AATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACT 195481 | ||| ||||| | |||||||| || |||||||| |||||||||||| || ||| Sbjct 26088 ACTGAGCGTCTGATCGGAGATGCTGCGAAAAATCAAGTCGCTATGAACCCTGCGAACACT 26147 Query 195482 GTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGAT 195541 ||||| || || ||||||||||| ||||||||||| | || | || || | ||| Sbjct 26148 GTCTTCGATGCTAAGCGTCTTATCGGTCGCAAGTTCGCAGACCCTGAGGTTCAGGCTGAT 26207 Query 195542 ATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTT 195601 || ||| ||| | | | ||| || | || | | || ||||| | || | ||| Sbjct 26208 ATGAAGCACTTCCCAT-TCAAG--GTCCTCGATCGCGGTGGAAAGCCAGTCGTTGAGGTT 26264 Query 195602 GAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATT 195661 || || | || |||||||| ||||| |||| || || || || || ||| | ||| | Sbjct 26265 GAGTTCAAGGGCGAGAAGAAGCAATTCACTCCTGAGGAGATCTCATCGATGATCTTGGTC 26324 Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||| |||||||| || | | | | ||| ||| || || | || || || ||| Sbjct 26325 AAGATGAGAGAGACTGCTGAGGCCTACCTTGGTGGAACCGTCAACAACGCTGTCGTTACT 26384 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTG--CTGCTATTG 195779 || ||||| ||||||| ||| |||||||| || || || |||||||||| ||| |||| Sbjct 26385 GTCCCTGCCTACTTCACTGACTCACAACGTCAAGCCACCAAGGACGCTGGCCTG--ATTG 26442 Query 195780 CGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTC 195839 | || || ||| ||| |||| |||||||| || || || || || ||||| || ||| Sbjct 26443 CTGGCCTCAACGTTCTCCGAATCATCAATGAGCCTACCGCAGCCGCCATTGCCTACGGTT 26502 Query 195840 TGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGT 195899 |||||||||| || | || || || | ||||| ||||| ||||| || || | Sbjct 26503 TGGACAAGAAGGTTGAGGGCGAGCGCAACGTCCTCATCTTCGATCTTGGTGGAGGAACCT 26562 Query 195900 TTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 | |||||||| ||| | | ||||| | ||||| ||||| || ||| |||||||||||| Sbjct 26563 TCGATGTCTCTCTTTTGACCATTGAGGAGGGTATCTTCGAGGTCAAGTCTACTGCTGGTG 26622 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAG 196018 ||||||| | |||||||| || ||||| ||||| || || || ||| | ||| Sbjct 26623 ATACTCACTTGGGTGGTGAGGACTTCGACAACCGTCTGGTCAACCACTTCGTC-AACGAG 26681 Query 196019 TTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGGCTTAGG 196078 ||| || ||| | ||||||||| | ||| || || | ||||| ||||| || | Sbjct 26682 TTCAAGCGCAAGCACAAGAAAGATTTATCTTCCAACGCTCGTGCTCTCCGTCGTCTCCGC 26741 Query 196079 ACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTTGAGATT 196138 ||||| || || |||||||| ||||| ||||| || | || ||||| |||| || Sbjct 26742 ACTGCTTGCGAGCGTGCCAAGCGAACCCTCTCCTCATCCGCCCAAACCTCCATTGAAATC 26801 Query 196139 GATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTTTTGAAGAG 196198 || || | || || || ||||| ||||| || | || |||||||| || || || ||| Sbjct 26802 GACTCTCTCTTCGAGGGTATTGATTTCTACACCTCCATCACCCGTGCTCGGTTCGAGGAG 26861 Query 196199 TTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTACTTCGTGACGCA 196258 | | || | || | | || || || | || ||| |||||| Sbjct 26862 CTTTGCCAGGACCTCTTCCGATCAACCACCACCCCAGTCGACCGTGTCCTTGCTGACGCC 26921 Query 196259 AAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCCGTATTCCG 196318 ||||| |||||||| ||||| | || || || || || ||||| || ||||||||||| Sbjct 26922 AAGATTGATAAGTCAAAGGTCCACGAGATCGTTCTCGTTGGAGGTTCCACCCGTATTCCC 26981 Query 196319 AAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACAAAACGATCAAC 196378 |||||| || | | | || |||||| || || ||||| | |||||| Sbjct 26982 CGTATTCAAAAGCTCATCACCGACTACTTCAACGGCAAGGAGCCCAACAAGTCAATCAAC 27041 Query 196379 CCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCAGGTGTTGAC 196438 || ||||| || || || || ||||| ||||| |||||||| |||||||| || |||| Sbjct 27042 CCCGATGAGGCCGTCGCCTACGGTGCCGCCGTCCAGGCTGCCATTCTCTC---TGGTGAC 27098 Query 196439 A------ATAA--TAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCCTGG 196490 | ||| ||| | |||||| || | || ||||| || || | ||| | | Sbjct 27099 ACCTCATCTAAGTCAACCAACGAGATCT--TGTTGCTCGATGTGGCGCCATTGTCCATCG 27156 Query 196491 GTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTCCGA 196550 || | || || || ||||| ||||| || | ||| | ||||| |||||||| | Sbjct 27157 GTATCGAGACTGCTGGTGGCCAGATGACCAAGCTCATTCCCCGCAACACCACTATTCCCA 27216 Query 196551 CTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTCAAG 196610 | |||||| | | || || || || | |||||||| ||||| ||||| | || |||| Sbjct 27217 CCAAGAAGTCAGAGGTTTTCTCTACCTTCTCCGATAACCAACCTGGTGTCCTCATCCAAG 27276 Query 196611 TATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGATTTGA 196670 | | || || ||||| || | ||||| ||| | || | || | ||||| | | Sbjct 27277 TCTTCGAGGGTGAACGTCAACGCACCAAGGACAACAACCTGTTGGGCAAGTTCGAGCTCA 27336 Query 196671 CGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATAGACG 196730 | || || ||| |||| ||| | |||||||| || || | || ||||||| | || | Sbjct 27337 CTGGTATCCCACCTGCGCCCCGTGGTGTTCCTCAAATCGAGGTCACCTTCGATGTCGATG 27396 Query 196731 CAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAGATTG 196790 | || || || |||||||| | ||| || |||| | ||||||| ||| | || |||| Sbjct 27397 CCAACGGTATCATAAACGTCTCTGCTCTCGAGAAGGGTACTGGCAAGTCTAACAAAATTG 27456 Query 196791 TGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAAGATG 196850 | |||||||| |||||||| || || || |||||||| || || |||||| | || | Sbjct 27457 TCATTACCAACGACAAGGGCCGTCTGTCCAAGGAGGACATCGAGCGTATGTTGGCCGAGG 27516 Query 196851 CGGAAAAGTACAGGGAAGAAGACGAGG 196877 | || ||||||| || || || |||| Sbjct 27517 CTGAGAAGTACAAGGCTGAGGATGAGG 27543 >seq3177 Length=131459 Score = 237 bits (262), Expect = 2e-57 Identities = 503/740 (68%), Gaps = 33/740 (4%) Strand=Plus/Minus Query 195710 GCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCT 195769 || ||| | ||||| || || ||||||| || || || || || || ||||| || Sbjct 115994 GCCGTTATCACTGTTCCCGCATACTTCAACGACAACCAGCGTCAAGCTACCAAGGATGCC 115935 Query 195770 GCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATT 195829 | ||| || || ||||| ||| |||| | || ||||| || || || || ||||| || Sbjct 115934 GGTGCCATCGCTGGTCTCAACGTTCTTCGTATCATCAACGAGCCTACTGCCGCTGCTATC 115875 Query 195830 GCTTATGGTCT-------GGACAAG---AACAAGGA-CGAAGATAAAAATGTATTGATCT 195878 || || ||||| ||| ||| |||||||| |||| |||| ||||| | Sbjct 115874 GCCTACGGTCTCGGTGCTGGA-AAGTCCAACAAGGAGCGAA-------ATGTTTTGATTT 115823 Query 195879 TTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCG 195938 ||||||||||||||| || || |||||||| || ||||| ||| | || ||| | ||| Sbjct 115822 ATGATCTCGGTGGTGGAACTTTCGATGTCTCCCTCCTCAACATTCAGGGAGGTGTTTTCA 115763 Query 195939 AAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTT- 195997 || |||||||||||||||||||| || | || || | ||||||||| | | ||| Sbjct 115762 CTGTCAAGGCTACTGCTGGTGATACCCACTTGGGAGGACAGGATTTCGATAC-CAACTTG 115704 Query 195998 CTCCGTCATTTGTCTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCT 196057 || || || | ||||||| || |||| ||||| ||||| || | || Sbjct 115703 CTTGAGCACTTCAAGAAGGAGTTCCAGCGCAAGACCAAGAAGGATATGTCCAACGACCCC 115644 Query 196058 AGGGCTCTTCGTCGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG 196117 | || ||| | || || | || || || || ||||| || |||||||| || | ||| Sbjct 115643 CGTGCCCTTAGACGTCTCCGTACCGCTTGCGAGCGTGCTAAGCGAACTCTTTC--CAACG 115586 Query 196118 --GCTCAAACAATGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTA 196175 ||||| || | ||||| |||||||| ||||||| ||| || ||| | | | Sbjct 115585 GTGCTCAGACCACTGTTGAAATTGATTCCCTGTTTGATGGAGAGGATTTCAACGCCCAAA 115526 Query 196176 TTACCCGTGCACGTTTTGAAGAGTTAAACTCTGATTTGTTTA--GGAAGTGTATGGAACC 196233 | |||||||| ||||| || || | || || | || | || | | |||| || Sbjct 115525 TCACCCGTGCTCGTTTCGAGGATCTGAATTCCAAGGCTTTCAATGGTA--CTTTGGATCC 115468 Query 196234 TGTTGAACAAGTACTTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCT 196293 |||| ||||| | || || || | |||||| |||||| ||||| || || || Sbjct 115467 GGTTGCCCAAGTCTTGAAGGATGCGAACCTCGATAAGAGTAAGGTCGATGAGATCGTTCT 115408 Query 196294 TGTGGGAGGATCAACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAA--T 196351 ||| || ||||| ||||||||||| ||| ||| || | || | ||||| | Sbjct 115407 TGTTGGTGGATCTACCCGTATTCCCCGGATACAAAAGCTCCTGAGTGATTTCTTTGACGG 115348 Query 196352 AATAAAGATTTAAACAAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTT 196411 || ||| || | || | |||||||| ||||| || ||||| || ||||| || ||| Sbjct 115347 AAAGAAGCTT--GAGAAGAGCATCAACCCCGATGAGGCTGTTGCGTACGGTGCTGCTGTT 115290 Query 196412 CAGGCTGCTATTCTCTCAGG 196431 ||||||| ||| ||||| || Sbjct 115289 CAGGCTGGTATCCTCTCCGG 115270 >seq332 Length=18159 Score = 199 bits (220), Expect = 5e-46 Identities = 184/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| || || || |||||||| || || ||||||| Sbjct 2247 GTGGTATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACTATCACTCTTGAAGTTGAGT 2188 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | ||||| || ||||| ||| | || | ||||||||||||||||| |||||||| || | Sbjct 2187 CCTCAGATACCATCGACAACGTTAAGTCGAAGATTCAAGATAAGGAGGGCATTCCCCCGG 2128 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 ||||||| || || |||||||| || || || ||||| ||||| |||||| | | || | Sbjct 2127 ATCAGCAGCGTCTCATTTTTGCGGGAAAGCAACTTGAGGATGGCCGTACCTTGTCCGACT 2068 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | ||||||||||||||||| ||| | || || | || || |||||| Sbjct 2067 ACAACATCCAAAAGGAGTCTACTCTCCACTTGGTCCTTCGTCTCCGCGGTGGT 2015 Score = 178 bits (196), Expect = 2e-39 Identities = 179/233 (77%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| || || | || || || ||||| || | || || |||| Sbjct 2019 GTGGTATGCAAATCTTTGTTAAGACTTTGACGGGCAAGACTATTACATTGGAAGTCGAGT 1960 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || ||| |||| | |||||||| |||||||| || || ||||| | Sbjct 1959 CCTCGGACACGATTGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGAATCCCACCTG 1900 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| ||||| || ||||||||||| ||||| || ||||| ||||| | |||| Sbjct 1899 ACCAGCAGCGACTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGTTGAGCGATT 1840 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| | ||||||||||||||||| ||| | || || | || || |||||| Sbjct 1839 ACAACATCCAAAAGGAGTCTACTCTCCACTTGGTCCTTCGTCTCCGTGGTGGT 1787 Score = 161 bits (178), Expect = 1e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||| || || ||||| ||||| |||||||| |||| || Sbjct 2729 ACTGGCAAGACCATCACCCTTGAAGTCGAGTCCAGCGACACCATCGATAATGTCAAGTCC 2670 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 |||||||| || ||||| || ||||| || || || ||||| || || || ||||| || Sbjct 2669 AAGATTCAGGACAAGGAGGGTATTCCTCCGGACCAACAACGCCTGATCTTCGCTGGCAAG 2610 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 ||||| || || || || || ||| |||| |||||| |||| |||||||| ||||| ||| Sbjct 2609 CAGCTCGAGGACGGTCGCACTCTCTCTGACTACAACATTCAGAAGGAGTCCACTCTTCAC 2550 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 |||||||| | ||||| || ||| Sbjct 2549 CTTGTTCTCCGTCTTCGTGGCGGT 2526 Score = 141 bits (156), Expect = 1e-28 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933 || || ||||| || || || || |||||||| ||||||||||| || || ||||| Sbjct 2458 GTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACCATCGAC 2399 Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993 || | || |||||||||| || ||||| |||||||| || || |||||||| | ||| Sbjct 2398 AATGTTAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAGCAACGTTTGATT 2339 Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053 || || || || || ||||| || || || |||||| | || || ||| | || |||||| Sbjct 2338 TTCGCCGGCAAGCAACTTGAGGACGGCCGCACCCTCTCCGACTATAACATCCAGAAGGAG 2279 Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || || || || || ||||| | || || |||||| Sbjct 2278 TCCACCCTTCATCTCGTTCTCCGTCTCCGTGGTGGT 2243 >seq3343 Length=27574 Score = 123 bits (136), Expect = 3e-23 Identities = 227/328 (69%), Gaps = 10/328 (3%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||||||| || || | | | || | || || |||| ||||| ||| Sbjct 18140 AAGATGAAGGAGACTGCTGAGTCCTACCTCACCAAGCCCGTCCAAAATGCTGTTGTCACT 18081 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || ||||| || || || |||||||||| | || || Sbjct 18080 GTCCCAGCCTACTTCAACGACTCGCAACGTCAAGCTACCAAGGACGCTGGTCAAATCGCT 18021 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| ||| ||| | | |||| || || || || ||||| | || ||||| || Sbjct 18020 GGTCTTAACGTTCTCCGTGTGGTCAACGAGCCTACCGCTGCTGCTCTCGCATATGGCCTT 17961 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| | ||||| ||||| | || | ||| ||| | || || || || || Sbjct 17960 GAGAAGGATGAGGAC-AAGAT--CATTGCA---GTCTACGATTTGGGAGGAGGAACCTTC 17907 Query 195902 GATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||| |||| ||||| | || |||| ||| | ||||| || ||| |||| |||| Sbjct 17906 GATATCTCCATTCTCGAGATCCAGAAG--GGTGTTTTCGAGGTTAAGTCTACCAACGGTG 17849 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGA 195987 |||| || | |||||||| |||||||| Sbjct 17848 ATACCCACTTGGGTGGTGAGGATTTCGA 17821 >seq2643 Length=14262 Score = 105 bits (116), Expect = 9e-18 Identities = 221/327 (68%), Gaps = 3/327 (1%) Strand=Plus/Minus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||| || ||||||| | || || | || | | || || || ||| Sbjct 2119 AAGATGAAGGAAGTCGCAGAATCTTATCTCGGAAACAAGGTCACCCACGCCGTCGTTACT 2060 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 ||||| || ||||||| || || |||| || |||||||| || | | || || Sbjct 2059 GTACCCGCATACTTCAACGACAACCAGAGACAAGCTACAAAGGATGCCGGTATCATCGCC 2000 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || | ||| ||| | ||| |||| ||||| || || || || ||||| || ||||| Sbjct 1999 GGCTTGAACGTCCTTCGTATTGTCAACGAACCCACCGCCGCAGCTATTGCGTACGGTCTC 1940 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||||| | | || | ||| |||| ||| ||||||||||| || || || Sbjct 1939 GACAAGACTGATGGAGAGCGTCAAA--TCATTG-TCTACGATCTCGGTGGAGGAACCTTC 1883 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || ||| ||| || ||||| | ||||| || | || || ||||| Sbjct 1882 GATGTTTCCCTCCTCTCTATCGACCGTGGTGTTTTCGAGGTTCTTTCCACCGCCGGTGAC 1823 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || | || ||||| ||||||||| Sbjct 1822 ACCCACTTGGGAGGTGAGGATTTCGAT 1796 >seq1553 Length=189915 Score = 89.7 bits (98), Expect = 7e-13 Identities = 329/503 (65%), Gaps = 28/503 (6%) Strand=Plus/Minus Query 198456 GATGTTGAGGGTATCGACTCAGCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAA 198515 ||||| | ||||| ||| ||| |||| || | |||| |||| | ||||| ||| Sbjct 21309 GATGTGGCTGGTATGGACGAAGCCAAGGCGGAAATTATGGAGTTTGTCCAATTTCTGAAA 21250 Query 198516 AACCCCGAAAAGTACTATGGAAGTGGTGCCCGAATCCCACGTGGTGCTCTTCTCGCCGGT 198575 | ||||| |||| | | | |||||| || || || || ||| | || | ||| Sbjct 21249 ACTCCCGAGAAGTTCCAGCGGTTAGGTGCCAAGATTCCCCGAGGAGCTATCCTTTCTGGT 21190 Query 198576 GCCCCGGGTACTGGTAAAACCCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCC 198635 | || ||||| ||||| || || |||| || | || || || ||| || || Sbjct 21189 CCACCAGGTACAGGTAAGACTCTCTTAGCAAAGGCAACTGCTGGCGAGTCGCAAGTACC- 21131 Query 198636 TTTCTTCAGTGCTCCGCGG---CGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAG 198692 ||||||||||| || | || |||||| | | ||||||||||||||||| ||||| Sbjct 21130 TTTCTTCAGTG-TCAGTGGTTCCGAGTT-CGTGGAGATGTTCGTTGGTGTCGGTGCATCA 21073 Query 198693 CGCGTCCGGGAACTCTTTGAGCAAGCACG-TGAAAATCA-ACCATGTATCATCTTCATTG 198750 | || || || ||||| || | || ||| | || |||||||| || ||||| | Sbjct 21072 AGAGTGCGAGA--TCTTTTCGCCATGGCGAGGAAGAGCACGCCATGTATAATTTTCATCG 21015 Query 198751 ATGAGATTGACGCTGTTGGTAAGAAGCGTGGTGGAA-------CTACTACA--CCTGGTA 198801 |||| || |||||| | || | |||| | |||||| | ||| || || | Sbjct 21014 ATGAAATCGACGCTATCGGCA--AAGC-TCGTGGAAAGAACACCAACTTCAGTGGAGGAA 20958 Query 198802 ATGATGAGCGTGAGCAGACGATTAACCAGCTTCTCACTGAGATGGATGGTTTTGACA--- 198858 ||||||||| || || | || ||| | | || || ||||||||||| ||| Sbjct 20957 CTGATGAGCGAGAAGCCACTCTCAATCAGATCTTGACAGAAATGGATGGTTTCAACACGC 20898 Query 198859 ATGAGACTGGTATCGTGGTGATTGCTGCTACAAATAGGATTGATATCCTAGATGATGCAC 198918 | ||| | | || ||| |||||| ||| || || || | || ||| | || Sbjct 20897 AGGAGCAAG---TTGTCGTGCTTGCTGGTACTAACAGACCAGACGTGCTCGATAAGGCGT 20841 Query 198919 TGCTTCGTCCCGGTCGATTCGAC 198941 || | ||||| ||||| |||||| Sbjct 20840 TGATGCGTCCAGGTCGTTTCGAC 20818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657834679323120