Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04- 21] 3,371 sequences; 50,693,610 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq481 82.4 7e-11 >seq481 Length=22500 Score = 82.4 bits (90), Expect = 7e-11 Identities = 128/182 (70%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| ||||| |||||| |||||||| || || |||||||| Sbjct 2589 GCTCGACAAGGTTCTCGTTGACGATTCCGTCGGATGCAGCGAAGAATGCAAGAACGTGGG 2648 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 || ||| | || || | ||| || ||| | ||||||||||| | || ||||| |||| Sbjct 2649 AAATGAAGTAACGCTCGTCGTCATTGAGTCTGTTGTTCCAGTCGTGAAGATCCTTAGACA 2708 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 || ||||| || | ||||| | | | | |||||||||||| |||| |||| Sbjct 2709 GATCAATCTCCTCTGCGGTCCAGAAAGATGCCTCGGCCTTCTTGTACATCTGCC--AGAT 2766 Query 110892 CT 110893 || Sbjct 2767 CT 2768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445075644834720