Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq332 86.0 4e-12
>seq332
Length=18159
Score = 86.0 bits (94), Expect = 4e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || ||||| || | ||||| || || || || | ||||| || ||| ||
Sbjct 2014 ATGCAAATCTTTGTTAAGACTTTGACGGGCAAGACTATTACATTGGAAGTCGAGTCCTCG 1955
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
||||| |||| | | || ||| ||| || || || || | || || || ||
Sbjct 1954 GACACGATTGACAACGTCAAGTCAAAGATTCAGGATAAGGAGGGAATCCCACCTGACCAG 1895
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790
||||| | || ||||| || || || ||||| || | || || || |||||||||||
Sbjct 1894 CAGCGACTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGTACGTTGAGCGATTACAAC 1835
Query 23791 ATACAAAAAGAGTCCAC 23807
|| ||||| ||||| ||
Sbjct 1834 ATCCAAAAGGAGTCTAC 1818
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337995713192468
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |