Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Cairneyella_20variabilis_20[genbank_20GCA_5F001625345.1_202016-04-
21] 3,371 sequences; 50,693,610 total letters
Query= NC_030842.1
Length=115510
Score E
Sequences producing significant alignments: (Bits) Value
seq1217 87.8 1e-12
>seq1217
Length=16346
Score = 87.8 bits (96), Expect = 1e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 27138 CTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTC 27197
||||| || ||||| |||||||| |||||||| ||||| |||| ||| || | |||
Sbjct 13309 CTTCAACGCATCCACATGATCCAGATAGACGTGTGCGTCACCCATGGTATGTATAAAGGT 13250
Query 27198 TCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGAT 27257
|| || | | || || ||||| | ||| | ||| ||||||| || ||||||||
Sbjct 13249 GCCTGGGACCAAATCGCACACATGAGCAAGCATATGCGTCAGGAGAGCATAACTGGCGAT 13190
Query 27258 GTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACA 27308
|| || || || || || ||||| || | || |||||||||||| ||
Sbjct 13189 ATTGAATGGGACACCAAGGCCCATATCGCAACTCCGCTGGTAGAGCTGGCA 13139
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 369492019143101
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |