Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1157 140 7e-28 >seq1157 Length=14967 Score = 140 bits (154), Expect = 7e-28 Identities = 182/252 (72%), Gaps = 0/252 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 |||||||| || || || | ||||||||| ||| | || || | || ||| Sbjct 10913 ATCATTACTGATGCCGTCTCTATCGAAAAGGAATTCCTGACCGAGGCATTGCCTTGTGCT 10972 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || |||| |||||| | || |||||| ||||||||||| ||||| |||||||| || Sbjct 10973 CTGCTTGGTATGAACTCGGATCTTATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTT 11032 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 |||| || |||||| ||||||| || ||||| |||| |||||||| | || |||||| Sbjct 11033 CTTGTCGCTCTTGGTAACGAGAAGGTCTACAAGTCTACCAACCCCTTCGACTTCATGGAG 11092 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 || || || || ||||| |||||||| || |||||||| |||| || || | | Sbjct 11093 AATATCTCCCTCGGTGGTAAGACTAACTTCTTTGAGAAGCGTGTAGGTGATTACCAAAAG 11152 Query 230626 CCTGGTGTGATG 230637 | ||||| ||| Sbjct 11153 GCCGGTGTCATG 11164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057805838484200