Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016 -07-28] 1,340 sequences; 51,439,042 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq881 123 3e-23 >seq881 Length=186784 Score = 123 bits (136), Expect = 3e-23 Identities = 194/275 (71%), Gaps = 12/275 (4%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 |||||||| || ||||| ||| |||||| |||||| |||| |||||| | || || ||| Sbjct 108324 AGCTGGTCGACTCCCTGGCCCGTGTAATCCGTCTTGTAGTCGACGTACTCTGCGCCAAAG 108383 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCG 146115 |||| ||||||||| ||||| || || || ||||| || ||| | ||| || Sbjct 108384 TGCCGCCACTGGAAGCCGTAAACAGGGCCGAGGTCGCCCTCCTCACGGTGTGTCAA---- 108439 Query 146116 GCCCGGG----CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTC 146169 |||| || ||||||| || ||||| || || | ||||| ||||||| || |||| Sbjct 108440 GCCCAGGTTATCGAGGAATTCGCGGGATCCATTTCCATCCCAAATCTTGATCCCAGCCTC 108499 Query 146170 GCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACC 146229 || |||||| ||||| ||| ||| |||||||||||| || || | | ||| Sbjct 108500 GCTGAGAGCC--TTGGAAGATGTGTTGCCCTCGATGAACCAGAGTAGTTCCGCAATGACG 108557 Query 146230 CCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGG 146264 | || || || | ||| ||||| || ||||| Sbjct 108558 GCTCTGGTAAAAACTCGCTTCGTGGTGAGGAGGGG 108592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590066916213600