Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Calonectria_20pseudonaviculata_20[genbank_20GCA_5F001696505.1_202016
-07-28] 1,340 sequences; 51,439,042 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 140 3e-28
seq732 138 1e-27
seq1157 129 6e-25
seq897 123 3e-23
>seq1144
Length=167757
Score = 140 bits (154), Expect = 3e-28
Identities = 144/186 (77%), Gaps = 2/186 (1%)
Strand=Plus/Plus
Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGA 40772
||||| || || |||||| |||| ||||| || |||| | | | | |||| |||||
Sbjct 91177 ACGGGAAAGACTATCACCCTCGAGGTCGAGTCCTCCGATACCATCGACAACG-TCAAGTC 91235
Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832
||| |||| ||||| || ||||||||| |||||||||| || ||||||| || |||||
Sbjct 91236 AAAGATTCAGGACAAGGAAGGCATCCCCCCGGACCAGCAGCGTCTCATCTTTGCTGGCAA 91295
Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892
||||| || || | || |||||| |||||||||||||||||||||| | || || ||
Sbjct 91296 GCAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTACCCTCCA 91355
Query 40893 TCTAGT 40898
|||||
Sbjct 91356 CCTAGT 91361
>seq732
Length=233276
Score = 138 bits (152), Expect = 1e-27
Identities = 160/213 (75%), Gaps = 2/213 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || || |||||| | || || || |
Sbjct 60572 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 60513
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| |||||||| ||| ||||
Sbjct 60512 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGA 60454
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| ||||| |||| || || || ||||| || || | |||||||| | ||||||
Sbjct 60453 CCAGCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 60394
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|||||||||||||||| ||| || || || ||
Sbjct 60393 CAACATCCAGAAGGAGAGCACTCTCCACCTGGT 60361
>seq1157
Length=14967
Score = 129 bits (142), Expect = 6e-25
Identities = 200/285 (70%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||| |||||| || |||||||||| |||||| | || ||
Sbjct 10253 ATCTGGCAGATGTACAAGAAGCACGAGGCTTCCTTCTGGACCGCCGAGGAAATTGATCTT 10312
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
|||||||| | ||||||| | |||||||| | | |||| ||| ||
Sbjct 10313 TCCAAGGATCTGCACGACTGGAATAACCGCTTGAATGCAGATGAGCAGTTCTTCGTCTCT 10372
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || || || |||||||| || || || || || || || ||||||||| |
Sbjct 10373 CACATTCTCGCTTTCTTCGCCGCATCTGATGGTATTGTGAATGAAAACCTGGTCGAGAGG 10432
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| | ||||| ||| | | ||||| || ||||||||||| || |||||| |||
Sbjct 10433 TTCAGTGCCGAGGTCCAGATCCCTGAGGCTCGTTGCTTCTACGGTTTCCAGATCATGATG 10492
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | ||||| || | || || |||||| ||||| |||
Sbjct 10493 GAGAACATCCACTCAGAGACTTACTCTCTCCTCATTGACACATAC 10537
Score = 96.9 bits (106), Expect = 4e-15
Identities = 302/458 (66%), Gaps = 16/458 (3%)
Strand=Plus/Plus
Query 116969 CCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCC 117028
|||||| |||| | ||||| |||||||| || | |||||| | | || ||||| ||
Sbjct 10640 CCGTGCATCAAGAAAAAGGCAGAGTGGGCCCTCAGGTGGATCTCGGACAAGCAGGCCACC 10699
Query 117029 TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTT-CGG-GCAGTT 117086
|| | | || || || || ||||| || |||||||| | || || ||| ||| |
Sbjct 10700 TTTGCTCAACGTCTCGTTGCATTCGCTGCTGTCGAGGGTATATTTTTCAGCGGTGCA--T 10757
Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146
|||| | || || ||| | ||||| || || || ||||| || | || ||| || |
Sbjct 10758 TCGCTTCTATCTTCTGGTTGAAGAAGCGAGGTCTTATGCCTGGTTTAACCTTCTCTAATG 10817
Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATT 117206
|||||||||| | || |||||||| || ||||| || || | || | |||
Sbjct 10818 AGCTCATCTCTCGTGATGAGGGTCTTCACACTGACTTCGCATGCCTTCTTCACTCTCATC 10877
Query 117207 TGGTGCAGCGACCGAGCGCGGC--GCGCGTCA---GGGAGATCGTCACCGACGCGGTCGC 117261
| || | ||| || | || || || | ||| ||| | || || || ||| |
Sbjct 10878 T----CAAGGGCCGTGC-CAGCAAGCAGGTAATTCAGGACATCATTACTGATGCCGTCTC 10932
Query 117262 CATCGAGCAGCGCTTCCTCACCGAAGCGCTGCC-GGTGCGTCTGCTGGGACTCAATTGCG 117320
||||| || ||||| ||||| || |||| |||| |||||| || | || | |
Sbjct 10933 TATCGAAAAGGAATTCCTGACCGAGGCATTGCCTTGTGC-TCTGCTTGGTATGAACTCGG 10991
Query 117321 AAACGATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCG 117380
| ||| ||| |||||||||||||| |||||| | || || ||| || | ||
Sbjct 10992 ATCTTATGAAGCAGTACATCGAGTTCGTTGCCGACCGTCTTCTTGTCGCTCTTGGTAACG 11051
Query 117381 CCAAGCACTACAACACGCCCAACCCGCTGGACTTTATG 117418
||| |||||| | ||||||| | ||||| |||
Sbjct 11052 AGAAGGTCTACAAGTCTACCAACCCCTTCGACTTCATG 11089
>seq897
Length=151945
Score = 123 bits (136), Expect = 3e-23
Identities = 136/181 (75%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || ||||||||||| ||||||||| | || ||||| || | |||| | |
Sbjct 73523 TTCGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCGGACACCATC 73582
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| ||||| || ||| |||||||||| || ||
Sbjct 73583 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGCCTG 73642
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| || ||||| || || || || | ||||||||| |||||||||||||||||||
Sbjct 73643 ATCTTTGCTGGCAAGCAACTCGAGGATGGCCGCACCCTCTCCGACTACAACATCCAGAAG 73702
Query 40879 G 40879
|
Sbjct 73703 G 73703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515210570078400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |